miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41838_bdi-MIR5169:mirbase
Length = 210
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 71 tttgaccaagtctatagaaaaatataccaacgtctac 107
||||||||||| ||||||||||||||||||| |||||
Sbjct: 177 tttgaccaagtttatagaaaaatataccaacatctac 141
>41876_far-MIR437:mirbase
Length = 160
Score = 52.0 bits (26), Expect = 2e-07
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 175 tggtcaaacttaaagatgttcgactttggataaacctagaacttcaagtatttggaaacg 234
||||||||| || ||| ||| ||||| ||| ||| |||||||||||| ||||| | ||||
Sbjct: 36 tggtcaaacatagagaagtttgacttaggacaaaactagaacttcaattattttggaacg 95
Query: 235 gatagagtat 244
||| ||||||
Sbjct: 96 gatggagtat 105
Score = 50.1 bits (25), Expect = 8e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 34 gaagttctaggtttgtcccaagtcaaacagctttatgtttgacca 78
|||||||||| ||||||| ||||||||| || ||||||||||||
Sbjct: 80 gaagttctagttttgtcctaagtcaaacttctctatgtttgacca 36
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tttgaccaagtctatagaaaaat 93
|||||||||||||||||||||||
Sbjct: 18 tttgaccaagtctatagaaaaat 40
>42063_osa-MIR437:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 45 tttgtcccaagtcaaacagctttatgtttgaccaagtctatagaaaaat 93
||||||| ||||||||| || || ||||||||||| |||||||||||
Sbjct: 183 tttgtcctaagtcaaacttctctaactttgaccaagtttatagaaaaat 135
