miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q5RE47|DX39B_PONAB Spliceosome RNA helicase DDX39B OS=Pongo
abelii GN=DDX39B PE=2 SV=1
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|Q29024|DX39B_PIG Spliceosome RNA helicase DDX39B OS=Sus scrofa
GN=DDX39B PE=3 SV=2
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|P60024|DX39B_PANTR Spliceosome RNA helicase DDX39B OS=Pan
troglodytes GN=DDX39B PE=3 SV=1
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|Q5TM17|DX39B_MACMU Spliceosome RNA helicase DDX39B OS=Macaca
mulatta GN=DDX39B PE=3 SV=1
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo
sapiens GN=DDX39B PE=1 SV=1
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|Q3T147|DX39B_BOVIN Spliceosome RNA helicase DDX39B OS=Bos taurus
GN=DDX39B PE=2 SV=1
Length = 428
Score = 66.2 bits (160), Expect = 6e-11
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAGGDGAEAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 31
>sp|Q5WR10|DX39B_CANFA Spliceosome RNA helicase DDX39B OS=Canis
familiaris GN=DDX39B PE=3 SV=1
Length = 428
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYE+DEVETAAGGDG+EAPA
Sbjct: 1 MAENDVDNELLDYEEDEVETAAGGDGSEAPA 31
>sp|Q63413|DX39B_RAT Spliceosome RNA helicase Ddx39b OS=Rattus
norvegicus GN=Ddx39b PE=1 SV=3
Length = 428
Score = 62.4 bits (150), Expect = 9e-10
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAG DG EAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGADGTEAPA 31
>sp|Q9Z1N5|DX39B_MOUSE Spliceosome RNA helicase Ddx39b OS=Mus
musculus GN=Ddx39b PE=1 SV=1
Length = 428
Score = 62.4 bits (150), Expect = 9e-10
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAPA 193
MAENDVDNELLDYEDDEVETAAG DG EAPA
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGADGTEAPA 31
>sp|Q5ZHZ0|DX39B_CHICK Spliceosome RNA helicase DDX39B OS=Gallus
gallus GN=DDX39B PE=2 SV=1
Length = 428
Score = 60.1 bits (144), Expect = 4e-09
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 101 MAENDVDNELLDYEDDEVETAAGGDGAEAP 190
MAENDVDNELLDYE+DEVE AAGGDG+EAP
Sbjct: 1 MAENDVDNELLDYEEDEVENAAGGDGSEAP 30
