miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31821_mmu-mir-92b:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccctcccaatattgcactcgtcccggcctcc 74
|||| ||||||||||||||||||||||||||
Sbjct: 43 ccctgccaatattgcactcgtcccggcctcc 73
>32702_rno-mir-92b:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccctcccaatattgcactcgtcccggcctcc 74
|||| ||||||||||||||||||||||||||
Sbjct: 43 ccctgccaatattgcactcgtcccggcctcc 73
>33180_bta-mir-92b:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccctcccaatattgcactcgtcccggcctcc 74
|||| ||||||||||||||||||||||||||
Sbjct: 52 ccctgccaatattgcactcgtcccggcctcc 82
>33952_ssc-mir-92b:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccctcccaatattgcactcgtcccggcctcc 74
|||| ||||||||||||||||||||||||||
Sbjct: 42 ccctgccaatattgcactcgtcccggcctcc 72
>33953_ssc-mir-92b:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 ccctcccaatattgcactcgtcccggcctcc 74
|||| ||||||||||||||||||||||||||
Sbjct: 42 ccctgccaatattgcactcgtcccggcctcc 72
>34258_dre-mir-92b:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctccc 75
|||||||||||||||||||||||||||
Sbjct: 52 ccaatattgcactcgtcccggcctccc 78
>25749_xtr-mir-92b:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 44 ccaatattgcactcgtcccggcctcc 69
>26668_cfa-mir-92b:mirbase
Length = 63
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 38 ccaatattgcactcgtcccggcctcc 63
>26990_eca-mir-92b:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 45 ccaatattgcactcgtcccggcctcc 70
>27697_mml-mir-92b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 57 ccaatattgcactcgtcccggcctcc 82
>28407_hsa-mir-92b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 57 ccaatattgcactcgtcccggcctcc 82
>30797_ppy-mir-92b:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 49 ccaatattgcactcgtcccggcctcc 74
||||||||||||||||||||||||||
Sbjct: 57 ccaatattgcactcgtcccggcctcc 82
>34875_sko-mir-92c:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 aatattgcactcgtcccggcct 72
||||||||||||||||||||||
Sbjct: 59 aatattgcactcgtcccggcct 80
>34949_xbo-mir-92a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 aatattgcactcgtcccggcct 72
||||||||||||||||||||||
Sbjct: 48 aatattgcactcgtcccggcct 69
>34820_spu-mir-92c:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 atattgcactcgtcccggcct 72
|||||||||||||||||||||
Sbjct: 60 atattgcactcgtcccggcct 80
>38110_bma-mir-92:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 52 atattgcactcgtcccggcct 72
|||||||||||||||||||||
Sbjct: 66 atattgcactcgtcccggcct 86
>25350_odi-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 tattgcactcgtcccggcct 72
||||||||||||||||||||
Sbjct: 66 tattgcactcgtcccggcct 85
>25466_pma-mir-92a:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 tattgcactcgtcccggcct 72
||||||||||||||||||||
Sbjct: 49 tattgcactcgtcccggcct 68
>24669_bfl-mir-92b:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 54 attgcactcgtcccggcct 72
|||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcct 80
>34818_spu-mir-92a:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 caatattgcactcgtcccggcct 72
|||||||||||| ||||||||||
Sbjct: 58 caatattgcacttgtcccggcct 80
>35008_dpu-mir-92:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 54 attgcactcgtcccggcct 72
|||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcct 80
>35363_ame-mir-92a:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 caatattgcactcgtcccggcct 72
|||||||||||| ||||||||||
Sbjct: 60 caatattgcacttgtcccggcct 82
>37577_ngi-mir-92a:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 caatattgcactcgtcccggcct 72
|||||||||||| ||||||||||
Sbjct: 54 caatattgcacttgtcccggcct 76
>37609_nlo-mir-92a:mirbase
Length = 93
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 caatattgcactcgtcccggcct 72
|||||||||||| ||||||||||
Sbjct: 54 caatattgcacttgtcccggcct 76
>37647_nvi-mir-92a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 caatattgcactcgtcccggcct 72
|||||||||||| ||||||||||
Sbjct: 59 caatattgcacttgtcccggcct 81
