miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P06912|RET4_RABIT Retinol-binding protein 4 OS=Oryctolagus
cuniculus GN=RBP4 PE=1 SV=2
Length = 201
Score = 73.6 bits (179), Expect = 4e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL
Sbjct: 147 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 179
>sp|P61641|RET4_PANTR Retinol-binding protein 4 OS=Pan troglodytes
GN=RBP4 PE=3 SV=1
Length = 201
Score = 67.0 bits (162), Expect = 3e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDP+GLPP+ QK+VRQRQEELCL
Sbjct: 147 CADSYSFVFSRDPNGLPPEAQKIVRQRQEELCL 179
>sp|P02753|RET4_HUMAN Retinol-binding protein 4 OS=Homo sapiens
GN=RBP4 PE=1 SV=3
Length = 201
Score = 67.0 bits (162), Expect = 3e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDP+GLPP+ QK+VRQRQEELCL
Sbjct: 147 CADSYSFVFSRDPNGLPPEAQKIVRQRQEELCL 179
>sp|P27485|RET4_PIG Retinol-binding protein 4 OS=Sus scrofa GN=RBP4
PE=1 SV=2
Length = 201
Score = 65.5 bits (158), Expect = 1e-10
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVF+RDPHG P+VQK+VRQRQEELCL
Sbjct: 147 CADSYSFVFARDPHGFSPEVQKIVRQRQEELCL 179
>sp|Q28369|RET4_HORSE Retinol-binding protein 4 OS=Equus caballus
GN=RBP4 PE=2 SV=1
Length = 201
Score = 63.2 bits (152), Expect = 5e-10
Identities = 26/33 (78%), Positives = 32/33 (96%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVF+RDP+G PP+VQ++VR+RQEELCL
Sbjct: 147 CADSYSFVFARDPNGFPPEVQRIVRRRQEELCL 179
>sp|P04916|RET4_RAT Retinol-binding protein 4 OS=Rattus norvegicus
GN=Rbp4 PE=1 SV=1
Length = 201
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDP+GL P+ ++LVRQRQEELCL
Sbjct: 147 CADSYSFVFSRDPNGLTPETRRLVRQRQEELCL 179
>sp|Q00724|RET4_MOUSE Retinol-binding protein 4 OS=Mus musculus
GN=Rbp4 PE=2 SV=2
Length = 201
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDP+GL P+ ++LVRQRQEELCL
Sbjct: 147 CADSYSFVFSRDPNGLSPETRRLVRQRQEELCL 179
>sp|P41263|RET4_CHICK Retinol-binding protein 4 OS=Gallus gallus
GN=RBP4 PE=1 SV=1
Length = 196
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVFSRDP GLPP+ QK+VRQRQ +LCL
Sbjct: 150 CADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182
>sp|P18902|RET4_BOVIN Retinol-binding protein 4 OS=Bos taurus
GN=RBP4 PE=1 SV=1
Length = 183
Score = 62.0 bits (149), Expect = 1e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
CADSYSFVF+RDP G P+VQK+VRQRQEELCL
Sbjct: 129 CADSYSFVFARDPSGFSPEVQKIVRQRQEELCL 161
>sp|P08938|PURP_CHICK Purpurin OS=Gallus gallus PE=1 SV=1
Length = 196
Score = 53.9 bits (128), Expect = 3e-07
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
C D YS +FSR+P GLPP +Q++VRQ+QEE+C+
Sbjct: 151 CDDGYSLIFSRNPRGLPPAIQRIVRQKQEEICM 183
>sp|P06172|RET4_XENLA Retinol-binding protein 4 OS=Xenopus laevis
GN=rbp4 PE=2 SV=1
Length = 197
Score = 53.5 bits (127), Expect = 4e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELCL 99
C DSYSFVFSRD +GLP + Q++VR+RQE+LCL
Sbjct: 149 CRDSYSFVFSRDINGLPSESQRIVRRRQEQLCL 181
>sp|P24775|RET4B_ONCMY Retinol-binding protein 4-B OS=Oncorhynchus
mykiss GN=rbp4b PE=1 SV=2
Length = 176
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELC 96
C D YSF+FSR P GL P+ QK+V +++ELC
Sbjct: 128 CLDGYSFIFSRHPTGLRPEDQKIVTDKKKELC 159
>sp|P24774|RET4A_ONCMY Retinol-binding protein 4-A OS=Oncorhynchus
mykiss GN=rbp4a PE=1 SV=2
Length = 176
Score = 43.9 bits (102), Expect = 3e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 1 CADSYSFVFSRDPHGLPPDVQKLVRQRQEELC 96
C D YSF+FSR P GL P+ QK+V +++E+C
Sbjct: 128 CLDGYSFIFSRHPTGLRPEDQKIVTDKKKEIC 159
