miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 117 bits (59), Expect = 2e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgct 68
||||||||| ||||| |||||| |||| ||||||||||| |||||||||||||||||||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68
Query: 69 cttatatttctttacagagggagtact 95
||||||||||||||| |||||||||||
Sbjct: 69 cttatatttctttacggagggagtact 95
Score = 107 bits (54), Expect = 2e-24
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgct 68
||||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34
Query: 69 cttatatttctttacagagggagtac 94
|| |||||||||||||||||||||||
Sbjct: 33 ctaatatttctttacagagggagtac 8
>48304_ave-miR1120:pmrd
Length = 85
Score = 109 bits (55), Expect = 4e-25
Identities = 81/90 (90%), Gaps = 6/90 (6%)
Strand = Plus / Minus
Query: 6 atatactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaac 65
|||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 85 atatactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaac 32
Query: 66 gctcttatatttctttacagagggagtact 95
||||||||||||||||||||||||||||||
Sbjct: 31 gctcttatatttctttacagagggagtact 2
Score = 99.6 bits (50), Expect = 4e-22
Identities = 76/85 (89%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgct 68
||||||||| ||||| |||||||||||| |||||||||||| |||||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 57
Query: 69 cttatatttctttacagagggagta 93
|||||||||||||||||||||||||
Sbjct: 58 cttatatttctttacagagggagta 82
>54756_tmo-miR1120:pmrd
Length = 85
Score = 107 bits (54), Expect = 2e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 12 tccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgctctt 71
|||||| |||||| ||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 72 atatttctttacagagggagta 93
||||| |||||||||||||||
Sbjct: 64 atattagtttacagagggagta 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 72/82 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgct 68
||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 69 cttatatttctttacagaggga 90
|||||||| ||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54761_tur-miR1120:pmrd
Length = 84
Score = 91.7 bits (46), Expect = 9e-20
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 12 tccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgctctt 71
|||||| |||||| ||||||||| ||||||||||||||| ||||||||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaa-gtagtgatctaaaaggtctt 62
Query: 72 atatttctttacagagggagta 93
||||| |||||||||||||||
Sbjct: 63 atattagtttacagagggagta 84
Score = 75.8 bits (38), Expect = 5e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcactaaagtagtgatctaaacgct 68
||||||||| |||||| ||||||||| ||||||||||||| | |||||||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 26
Query: 69 cttatatttctttacagaggga 90
|||||||| ||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54753_tae-miR2033b:pmrd
Length = 72
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 53 tagtgatctaaacgctcttatatttctttacagagggagta 93
||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 32 tagtgatctaaacactcttatatttctttacagaaggagta 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 64 acgctcttatatttctttacagagggagta 93
||||||||||||||||||| |||||||||
Sbjct: 30 acgctcttatatttctttatggagggagta 1
Score = 42.1 bits (21), Expect = 7e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaacaaatataagagcttttagatcacta 49
|||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcacta 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaacaaatataagagc 36
|||||||||| |||| ||||||||||||
Sbjct: 1 tactccctccataaagaaatataagagc 28
>54752_tae-miR2033a:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 atatttctttacagagggagta 93
||||||||||||||||||||||
Sbjct: 75 atatttctttacagagggagta 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tcttatatttctttacagag 87
||||||||||||||||||||
Sbjct: 41 tcttatatttctttacagag 60
