miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37226_dsi-mir-193:mirbase
Length = 120
Score = 101 bits (51), Expect = 9e-23
Identities = 89/98 (90%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 4 cccattatggttgggattttttagatcagcagttattgctaca-agtcaaaaatttat-t 61
||||||||||||||||||||||||||||||||||||||||| | || | | ||||||
Sbjct: 12 cccattatggttgggattttttagatcagcagttattgctatatagcc--atatttataa 69
Query: 62 atcatctactggcctactaagtcccaacataatgagag 99
||| ||||||||||||||||||||||||||||||||||
Sbjct: 70 atcttctactggcctactaagtcccaacataatgagag 107
>36397_dme-mir-193:mirbase
Length = 108
Score = 95.6 bits (48), Expect = 6e-21
Identities = 86/95 (90%), Gaps = 4/95 (4%)
Strand = Plus / Plus
Query: 7 attatggttgggattttttagatcagcagttattgctaca-agtcaaaaatttat-tatc 64
|||||||||||||||||||||||||||||||||||||| | || | | |||||| |||
Sbjct: 12 attatggttgggattttttagatcagcagttattgctatatagcc--atatttataaatc 69
Query: 65 atctactggcctactaagtcccaacataatgagag 99
||||||||||||||||||||||||||||||||||
Sbjct: 70 ttctactggcctactaagtcccaacataatgagag 104
>36398_dme-mir-193:mirbase
Length = 108
Score = 95.6 bits (48), Expect = 6e-21
Identities = 86/95 (90%), Gaps = 4/95 (4%)
Strand = Plus / Plus
Query: 7 attatggttgggattttttagatcagcagttattgctaca-agtcaaaaatttat-tatc 64
|||||||||||||||||||||||||||||||||||||| | || | | |||||| |||
Sbjct: 12 attatggttgggattttttagatcagcagttattgctatatagcc--atatttataaatc 69
Query: 65 atctactggcctactaagtcccaacataatgagag 99
||||||||||||||||||||||||||||||||||
Sbjct: 70 ttctactggcctactaagtcccaacataatgagag 104
>36939_dps-mir-193:mirbase
Length = 102
Score = 77.8 bits (39), Expect = 1e-15
Identities = 86/98 (87%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 4 cccattatggttgggattttttagatcagcagttattgctaca-agtcaaaaatttat-t 61
|||||||| |||||||||||||||||||||||||||||||| | || | ||| ||
Sbjct: 5 cccattatagttgggattttttagatcagcagttattgctatacagcc--gtattaataa 62
Query: 62 atcatctactggcctactaagtcccaacataatgagag 99
||| ||||||||||||||||||||||||||||||||||
Sbjct: 63 atcttctactggcctactaagtcccaacataatgagag 100
>35198_aae-mir-193:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 ctactggcctactaagtcccaac 89
|||||||||||||||||||||||
Sbjct: 71 ctactggcctactaagtcccaac 93
