miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00436;UnaL2;CR384103.7/76406-76353 7955:Danio rerio (zebrafish)
Length = 54
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 81 taggtcactttggataaaagcctttgccaaatgcata 117
||||||||||||||||||||| | |||||||||||||
Sbjct: 15 taggtcactttggataaaagcatctgccaaatgcata 51
>RF00436;UnaL2;FJ171645.1/202-255 7965:Aristichthys nobilis (bighead
carp)
Length = 54
Score = 50.1 bits (25), Expect = 8e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 73 atgcactgtaggtcactttggataaaagcctttgccaaatgcata 117
||||| |||| ||| |||||||||||||| | |||||||||||||
Sbjct: 7 atgcaatgtaagtcgctttggataaaagcgtctgccaaatgcata 51
>RF00436;UnaL2;CAAK05058176.1/4547-4495 7955:Danio rerio (zebrafish)
Length = 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 86 cactttggataaaagcctttgccaaatgcata 117
|||||||||||||||| | |||||||||||||
Sbjct: 19 cactttggataaaagcatctgccaaatgcata 50
>RF00436;UnaL2;BX511230.4/40397-40344 7955:Danio rerio (zebrafish)
Length = 54
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 77 actgtaggtcactttggataaaagcctttgccaaat 112
|||||| |||||||||||||||||||| ||| ||||
Sbjct: 11 actgtaagtcactttggataaaagcctctgctaaat 46
>RF00436;UnaL2;BX649332.3/109931-109878 7955:Danio rerio (zebrafish)
Length = 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tgtaggtcactttggataaaagc 101
|||||||||||||||||||||||
Sbjct: 13 tgtaggtcactttggataaaagc 35
>RF00436;UnaL2;BX510647.10/193762-193815 7955:Danio rerio
(zebrafish)
Length = 54
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 tgtaggtcactttggataaaagc 101
|||||||||||||||||||||||
Sbjct: 13 tgtaggtcactttggataaaagc 35
>RF00436;UnaL2;BX510360.8/171853-171799 7955:Danio rerio (zebrafish)
Length = 55
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 80 gtaggtcactttggataaaagcctttgccaaatg 113
||||||||| |||||||||||| ||||| |||||
Sbjct: 15 gtaggtcaccttggataaaagcgtttgctaaatg 48
>RF00436;UnaL2;CR450822.4/15808-15860 7955:Danio rerio (zebrafish)
Length = 53
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 79 tgtaggtcactttggataaaagcctttgccaaat 112
|||| |||||||||||||||||| | ||||||||
Sbjct: 12 tgtaagtcactttggataaaagcatctgccaaat 45
>RF00436;UnaL2;CAAK05017125.1/4288-4234 7955:Danio rerio (zebrafish)
Length = 55
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 84 gtcactttggataaaagcctttgccaaatgcata 117
||||||||||||||||| | |||||||||||||
Sbjct: 19 gtcactttggataaaagtgtctgccaaatgcata 52
>RF00436;UnaL2;CAAK05008145.1/21931-21878 7955:Danio rerio
(zebrafish)
Length = 54
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 84 gtcactttggataaaagcctttgccaaatg 113
|||||||||||||||||| | |||||||||
Sbjct: 18 gtcactttggataaaagcatctgccaaatg 47
>RF00436;UnaL2;AL672088.9/92969-92916 7955:Danio rerio (zebrafish)
Length = 54
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 84 gtcactttggataaaagcctttgccaaatg 113
|||||||||||||||||||| ||| |||||
Sbjct: 18 gtcactttggataaaagcctctgctaaatg 47
>RF00436;UnaL2;CR735126.7/40800-40750 7955:Danio rerio (zebrafish)
Length = 51
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 84 gtcactttggataaaagcctttgccaaatgcata 117
|||||||||||||||||| | |||||||| ||||
Sbjct: 15 gtcactttggataaaagcatctgccaaatacata 48
>RF00436;UnaL2;CAAK05010986.1/995-1045 7955:Danio rerio (zebrafish)
Length = 51
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 88 ctttggataaaagcctttgccaaatgcata 117
|||||||||||||||| ||||| |||||||
Sbjct: 19 ctttggataaaagcctctgccagatgcata 48
