miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q9VSF2|MED24_DROME Mediator of RNA polymerase II transcription
subunit 24 OS=Drosophila melanogaster GN=MED24 PE=1 SV=2
Length = 993
Score = 88.2 bits (217), Expect = 1e-17
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = +1
Query: 1 RVYCVTALLEFLVSIIDGITCRIKSEETLLPGAMVQLVLWIMQIFARTLQQYEM 162
RVYC+TALLEFL SI+DG+TCRIKSEE +LP ++V LV W++QIFART+Q YE+
Sbjct: 91 RVYCITALLEFLASIVDGVTCRIKSEEAVLPSSVVHLVYWLLQIFARTVQHYEL 144
>sp|Q7Q6D9|MED24_ANOGA Mediator of RNA polymerase II transcription
subunit 24 OS=Anopheles gambiae GN=MED24 PE=3 SV=4
Length = 1036
Score = 60.1 bits (144), Expect = 4e-09
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +1
Query: 7 YCVTALLEFLVSIIDGITCRIKSEETLLPGAMVQLVLWIMQIFARTLQQY 156
+C+ ALL+FL SIIDG+TCR K EE +L A V LV W++QI+ LQ Y
Sbjct: 101 HCLIALLDFLKSIIDGVTCRGKQEEAILTKATVSLVHWLLQIYECVLQSY 150
>sp|Q16X15|MED24_AEDAE Mediator of RNA polymerase II transcription
subunit 24 OS=Aedes aegypti GN=MED24 PE=3 SV=1
Length = 1005
Score = 58.9 bits (141), Expect = 1e-08
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +1
Query: 7 YCVTALLEFLVSIIDGITCRIKSEETLLPGAMVQLVLWIMQIFARTLQQY 156
+C+ ALLEFL SII G+TCR K EE LL AM+ LV W+MQI+ ++ +
Sbjct: 101 HCLIALLEFLESIIGGVTCRGKQEEGLLTKAMLSLVYWLMQIYEHAIETF 150
