miRNEST 2.0, an integrative microRNA resource :: BLAST
>46679_miR1439:micropc
Length = 97
Score = 153 bits (77), Expect = 3e-38
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 1 tactccctccgtctcaaaataactgtctcaactttgtactagctctagtataaaattgta 60
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
|||||||||||||| ||||||||| ||||||||||||
Sbjct: 61 ctaagcttgagacacttattttggaacggagggagta 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgggacggagggagta 108
||||||||||||||||| |||||||||||||
Sbjct: 31 ttgagacagttattttgagacggagggagta 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
|||||||||||| |||||||||||||||||
Sbjct: 97 tactccctccgttccaaaataagtgtctcaa 67
>45970_miR1439:micropc
Length = 99
Score = 123 bits (62), Expect = 3e-29
Identities = 89/98 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| ||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39
Query: 72 ctaagcttgagacagttattttgggacggagggagtac 109
|||||||| ||| | |||||||||||||||||||||||
Sbjct: 38 ctaagcttaagagacttattttgggacggagggagtac 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 aactttgtactagctctagtacaaagttg 69
|||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||| ||||||||||||||||||||||||||
Sbjct: 68 ttgatacagttattttgggacggagggagta 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagt 35
||||||||||||| ||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>45205_miR1439:micropc
Length = 99
Score = 123 bits (62), Expect = 3e-29
Identities = 89/98 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||| ||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaactttgtactagagctagtacaaagttata 39
Query: 72 ctaagcttgagacagttattttgggacggagggagtac 109
|||||||| ||| | |||||||||||||||||||||||
Sbjct: 38 ctaagcttaagagacttattttgggacggagggagtac 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 aactttgtactagctctagtacaaagttg 69
|||||||||||||||||||||||||||||
Sbjct: 42 aactttgtactagctctagtacaaagttg 70
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||| ||||||||||||||||||||||||||
Sbjct: 68 ttgatacagttattttgggacggagggagta 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagt 35
||||||||||||| ||||||||||
Sbjct: 2 tactccctccgtcccaaaataagt 25
>45189_miR1439:micropc
Length = 78
Score = 60.0 bits (30), Expect = 4e-10
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 67 ttgtactaagcttgagacagttattttgggacggagggagta 108
|||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 36 ttgtactaag-ttgagacagttattttggaacggagggagta 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtac 50
|||||||||||| |||||||| ||||||||||| ||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaacttagtac 38
>46754_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
|||||||||||| || |||| || ||||||||||||||| || |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46594_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
|||||||||||| || |||| || ||||||||||||||| || |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46493_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
|||||||||||| || |||| || ||||||||||||||| || |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46463_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
|||||||||||| || |||| || ||||||||||||||| || |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
>46315_miR1439:micropc
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
|||||||||||| || |||| || ||||||||||||||| || |||||||||
Sbjct: 1 tactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 54
