miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                   
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
          ||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatacta 40



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 11 ctactccctccgtctcaaaataagtgtctcaacttt 46
          |||||||||||||| ||||||||||| |||||||||
Sbjct: 5  ctactccctccgtcccaaaataagtgactcaacttt 40



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 78  ttgagacagttattttgggacggagggagta 108
           ||||| || ||||||||||||||||||||||
Sbjct: 36  ttgagtcacttattttgggacggagggagta 6



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 78  ttgagacagttattttgggacggagggagta 108
           ||||| || ||||||||||||||||||||||
Sbjct: 50  ttgagtcacttattttgggacggagggagta 80




>48325_bdi-miR2502:pmrd
          Length = 94

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 84  cagttattttgggacggagggagtacatg 112
           ||||||||||| |||||||||||||||||
Sbjct: 29  cagttattttgagacggagggagtacatg 1



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tactccctccgtctcaaaataa 33
          ||||||||||||||||||||||
Sbjct: 5  tactccctccgtctcaaaataa 26




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 11  ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaa 65
           |||||||||||||  || ||||  || ||||||||||||||| || |||||||||
Sbjct: 114 ctactccctccgttccagaatagatgactcaactttgtactaactttagtacaaa 60




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 89  attttgggacggagggagtaca 110
           ||||||||||||||||||||||
Sbjct: 45  attttgggacggagggagtaca 24




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 10 tctactccctccgtctcaaaataagt 35
          ||||||||||||||| ||||||||||
Sbjct: 97 tctactccctccgtcccaaaataagt 72



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 74  ttattttgggacggagggagta 95




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 10 tctactccctccgtctcaaaataagt 35
          ||||||||||||||| ||||||||||
Sbjct: 97 tctactccctccgtcccaaaataagt 72



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 74  ttattttgggacggagggagta 95




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 10 tctactccctccgtctcaaaataagt 35
          ||||||||||||||| ||||||||||
Sbjct: 5  tctactccctccgtcccaaaataagt 30



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 28  ttattttgggacggagggagta 7




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 88  tattttgggacggagggagtac 109
           ||||||||||||||||||||||
Sbjct: 72  tattttgggacggagggagtac 93




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagta 11




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 32  ttattttgggacggagggagta 11




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 22  ttattttgggacggagggagta 1



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tactccctccgtctcaaaataagtg 36
          ||||||||||||| |||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25




>49314_osa-miRf10099-akr:pmrd
          Length = 144

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 88  tattttgggacggagggagtac 109
           ||||||||||||||||||||||
Sbjct: 34  tattttgggacggagggagtac 13




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 70  ttattttgggacggagggagta 91




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 101 ttattttgggacggagggagta 122




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 87  ttattttgggacggagggagta 108
           ||||||||||||||||||||||
Sbjct: 66  ttattttgggacggagggagta 87



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 86  gttattttgggacggagggagtac 109
           ||||||| ||||||||||||||||
Sbjct: 24  gttatttcgggacggagggagtac 1