miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 153 bits (77), Expect = 6e-37
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
|||||||||||| ||||||||||| ||||||||||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagta 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||| ||||||||||||
Sbjct: 35 ttgagacacttattttggaacggagggagta 5
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 149 bits (75), Expect = 1e-35
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagtac 109
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggagtac 4
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 147 bits (74), Expect = 4e-35
Identities = 93/98 (94%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 ctactccctcc-tcccaaaataagtgtctcaactttgtactagttctagtacaaagttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagta 108
|||| ||||||||||||||||||||||||||| |||||
Sbjct: 42 actaggcttgagacagttattttgggacggagtgagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 44 caactttgtactagaactagtacaaagttg 73
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 147 bits (74), Expect = 4e-35
Identities = 92/98 (93%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||| |||||||| ||||||||||||||| || || ||||||||||||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagta 108
||||||||||||||| ||||||||||||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 145 bits (73), Expect = 1e-34
Identities = 91/97 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
|||||||||||||| ||||||||||||||||||||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 145 bits (73), Expect = 1e-34
Identities = 94/101 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgta 42
Query: 72 ctaagcttgagacagttattttgggacggagggagtacatg 112
||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 41 ctaggcttgagacacttattttgagacggagggagtacatg 1
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
|||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaa 35
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 81 agacagttattttgggacggagggagtac 109
||||| |||||||||||||||||||||||
Sbjct: 74 agacacttattttgggacggagggagtac 102
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 141 bits (71), Expect = 2e-33
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||| |||||| ||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 72 ctaagcttgagacagttattttgggacggagggagtaca 110
|||| |||||||||||||||||||||||||||||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagtaca 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||| ||||||
Sbjct: 35 ttgagacacttattttgggacggatggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| |||||||| ||||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaa 71
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 141 bits (71), Expect = 2e-33
Identities = 92/99 (92%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||
Sbjct: 102 ctactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagtac 109
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 42 actaagtttgagaaagttattttgggacggagggagtac 4
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 141 bits (71), Expect = 2e-33
Identities = 80/83 (96%)
Strand = Plus / Minus
Query: 26 caaaataagtgtctcaactttgtactagctctagtacaaagttgtactaagcttgagaca 85
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87 caaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagaca 28
Query: 86 gttattttgggacggagggagta 108
||||||||| || ||||||||||
Sbjct: 27 gttattttgagatggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
|||||||||| ||||||||||| ||||||||
Sbjct: 5 tactccctccatctcaaaataactgtctcaa 35
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 139 bits (70), Expect = 9e-33
Identities = 88/94 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 72 ctaagcttgagacagttattttgggacggaggga 105
|||||||| ||||| ||||||| |||| ||||||
Sbjct: 41 ctaagcttaagacacttattttaggaccgaggga 8
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
||||||||||||||||| |||||||||||||
Sbjct: 71 ttgagacagttattttgagacggagggagta 101
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 139 bits (70), Expect = 9e-33
Identities = 91/98 (92%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||| |||||||| ||||||||||||||| || || |||||||| |||||
Sbjct: 102 ctactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaggttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagta 108
||||||||||||||| ||||||||||||||||||||||
Sbjct: 42 actaagcttgagacacttattttgggacggagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaa 35
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||||||||||
Sbjct: 71 ttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 137 bits (69), Expect = 4e-32
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 100 tactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgta 41
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
| ||| ||||||||||||||||| |||||||||||||
Sbjct: 40 caaag-ttgagacagttattttgagacggagggagta 5
Score = 69.9 bits (35), Expect = 7e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtac 50
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataactgtctcaactttgtac 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 43 caactttgtactagagctagtacaaagttg 72
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 133 bits (67), Expect = 6e-31
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||
Sbjct: 102 ctactccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagtac 109
|||||| || ||||| |||||||| ||||||||||||||
Sbjct: 42 actaagattaagacacttattttgagacggagggagtac 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtct 39
||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
||||||||||||||||| ||| |||||||||
Sbjct: 71 ttgagacagttattttgagacagagggagta 101
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 131 bits (66), Expect = 2e-30
Identities = 90/98 (91%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 102 ctactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgt 43
Query: 71 actaagcttgagacagttattttgggacggagggagta 108
||||||| ||| ||| |||||||| | ||||||||||
Sbjct: 42 actaagcatgaaacaattattttgaaatggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 caactttgtactagctctagtacaaagttg 69
|||||||||||||| ||||||||||||||
Sbjct: 44 caactttgtactagagctagtacaaagttg 73
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||| |||||| ||||||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 5 tactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgta 64
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||||| |||||||| ||||||||||||||||||||||
Sbjct: 65 ctaaggttgagacacttattttgggacggagggagta 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaac 43
||||||||||||| ||||||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaac 70
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgggacggagggagtac 109
|||||||| ||||||||||||||| |||||||
Sbjct: 35 ttgagacacttattttgggacggaaggagtac 4
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 129 bits (65), Expect = 9e-30
Identities = 90/97 (92%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||||||||||| |||||||||| |||||||| ||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||||| |||||||| ||||||||||||||||||||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaac 43
||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaac 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 tgagacagttattttgggacggagggagta 108
||||||| ||||||||||||||||||||||
Sbjct: 71 tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| || ||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 101 tactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattttta 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||||||| ||||| ||||||||||||||||||||||
Sbjct: 41 ctaagctcaagacacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagtaca 110
|||||||| ||||||||||| ||||||||||||
Sbjct: 71 ttgagacacttattttgggatggagggagtaca 103
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtct 39
||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtct 32
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgta 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||| ||| ||||| ||||||||| ||||||||||||
Sbjct: 41 ctacgctcaagacacttattttggaacggagggagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagtacat 111
||||||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagtacat 104
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 129 bits (65), Expect = 9e-30
Identities = 89/97 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| |||||||||||| |||||| ||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||||||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 2e-27
Identities = 88/97 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| |||||||||||| |||||| |||| || ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||||||||||||||||||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||||||||||||||||||||||||||
Sbjct: 71 ttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 119 bits (60), Expect = 9e-27
Identities = 81/88 (92%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgt 70
|||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 4 ctactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgt 63
Query: 71 actaagcttgagacagttattttgggac 98
|||||| |||||| ||||||||||||||
Sbjct: 64 actaagtttgagaaagttattttgggac 91
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 115 bits (58), Expect = 1e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||||||||||||||||| ||| || ||| |||||||| |||| ||||||| ||
Sbjct: 5 tactccctccgtctcaaaataagtttcttaattttatactagct-tagtgcaaagttata 63
Query: 72 ctaagcttgagacagttattttgggacggagggagtac 109
|||||||||||||| |||||||| ||||||||||||||
Sbjct: 64 ctaagcttgagacaattattttgagacggagggagtac 101
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
|||||||||||||||||||||| ||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaa 70
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 109 bits (55), Expect = 8e-24
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgtact 73
||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgtact 66
Query: 74 aagcttgagacagttattttgggacggagggagta 108
| |||||||| |||||||| || |||| |||||
Sbjct: 67 agagttgagacacttattttgagatggagtgagta 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 78 ttgagacagttattttgggacggagggag 106
|||||||| ||||||||||||||||||||
Sbjct: 35 ttgagacacttattttgggacggagggag 7
Score = 50.1 bits (25), Expect = 7e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaact 44
||||| |||| ||||||||||||||||||||||
Sbjct: 101 tactcactccatctcaaaataagtgtctcaact 69
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||| |||||||| |||||||| ||||||||||||||| ||| | ||||||||| |||||
Sbjct: 101 tacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattgta 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||||||| ||||| ||||||||| ||||||||||||
Sbjct: 41 ttaagcttaagacacttattttggaacggagggagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagtacat 111
|||||||||||||||||||||||||| |||||||
Sbjct: 71 ttgagacagttattttgggacggaggaagtacat 104
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 105 bits (53), Expect = 1e-22
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| ||||||| ||||| |||||||||||||||| ||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 72 ctaagcttgagacagttattttgggacggaggg 104
|||||||| ||||| ||||||||||||||||||
Sbjct: 41 ctaagcttaagacacttattttgggacggaggg 9
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 agacagttattttgggacggagggagta 108
|||||| |||||||||||||||||||||
Sbjct: 74 agacagatattttgggacggagggagta 101
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 101 bits (51), Expect = 2e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| || ||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 72 ctaagct 78
|||||||
Sbjct: 48 ctaagct 42
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtgtct 39
|||||||||||||| ||||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtct 32
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
|||||||| ||||||||||| ||||||||||
Sbjct: 78 ttgagacacttattttgggatggagggagta 108
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 99.6 bits (50), Expect = 8e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 8 tttctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagt 67
||||||||||||||||| |||||||| ||||| |||||||| |||||||||||| ||| |
Sbjct: 105 tttctactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaat 46
Query: 68 tgtactaagcttgagacagttatttt 93
| |||||||||| ||||| |||||||
Sbjct: 45 tatactaagcttaagacacttatttt 20
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 agacagttattttgggacggagggagta 108
||||| ||||||||||||||||||||||
Sbjct: 74 agacaattattttgggacggagggagta 101
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||||||| |||||||| |||||||| ||||||||| || |||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 72 ctaagcttgaga 83
||||| ||||||
Sbjct: 89 ctaaggttgaga 78
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 36 gtctcaactttgtactagctctagtacaaagttgtactaagcttgagacagttattttgg 95
||||||||||||||||| | |||| ||||||||||||||| |||||||| |||||||||
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 96 gacggagggag 106
|||| ||||||
Sbjct: 17 gacgaagggag 7
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 77 cttgagacagttattttgggacggagggagta 108
||||||||||||||||||||||||||||||||
Sbjct: 118 cttgagacagttattttgggacggagggagta 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtctcaac 43
|||||| |||| ||||||||||||||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaac 36
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 83.8 bits (42), Expect = 5e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
||||||||| || |||||||| ||||| ||||||||||||||| || || ||| || ||
Sbjct: 5 tactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttata 64
Query: 72 ctaagcttgagacagttattttgggacggagggagtac 109
||||| || ||||| |||||||| ||||||||||||||
Sbjct: 65 ctaagtttaagacatttattttgcgacggagggagtac 102
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 81.8 bits (41), Expect = 2e-15
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttgta 71
|||||||||| || |||||||||||| | || |||||| ||||| ||||| |||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 72 ctaagcttgagacagttattttgggacggagggagta 108
||||| |||||||| ||||||| | ||||| ||||||
Sbjct: 41 ctaagattgagacacttattttagaacggaaggagta 5
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 57 tagtacaaagttgtactaagcttgagacagttattttgggacggagggag 106
|||||||||||| |||||| |||||||| ||||||||||||||||||||
Sbjct: 56 tagtacaaagttatactaaagttgagacacttattttgggacggagggag 7
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 14 ctccctccgtctcaaaataagtgtctcaacttt 46
||||||||||| |||||||||||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaacttt 39
Score = 52.0 bits (26), Expect = 2e-06
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 67 ttgtactaagcttgagacagttattttgggacggagggagta 108
|||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 49 ttgtactaag-ttgagacacttattttgggacggaggaagta 89
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
||||||||||||| |||| |||||| ||||||||| ||||| || |||||||||||||
Sbjct: 90 tactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 5 tactccctctgtcccaaaataagtgactcaactttgtacta 45
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 65.9 bits (33), Expect = 1e-10
Identities = 86/100 (86%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtg--tctcaactttgtactagctctagtacaaagtt- 68
||||||||||||| ||||||||||| |||||||||| ||||| | ||||||||| ||
Sbjct: 5 tactccctccgtcccaaaataagtggatctcaactttatactatttttagtacaaaatta 64
Query: 69 gtactaagcttgagacagttattttgggacggagggagta 108
|||| ||| ||||| || |||||| |||||||||||||||
Sbjct: 65 gtacaaag-ttgagtcacttatttcgggacggagggagta 103
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 103 tactccctccgtcccgaaataagtgactcaactttgtacta 63
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtacta 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
||||| || ||||||||||||||||||||||
Sbjct: 70 ttgagtcacttattttgggacggagggagta 100
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtacta 45
Score = 50.1 bits (25), Expect = 7e-06
Identities = 48/53 (90%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 57 tagtacaaagtt-gtactaagcttgagacagttattttgggacggagggagta 108
|||||||||||| |||| ||| ||||| || ||||||||||||||||||||||
Sbjct: 56 tagtacaaagttagtacaaag-ttgagtcacttattttgggacggagggagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||| |||| || ||||||||||| |||||||||||||||
Sbjct: 128 tactcgctccatcccaaaataagtgactcaactttgtacta 88
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 61.9 bits (31), Expect = 2e-09
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtgtct-caactttgtacta 52
|||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtctccaactttgtacta 46
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 gagacagttattttgggacggagggagta 108
|||||| ||||||||||||||||||||||
Sbjct: 33 gagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||| ||||||| |||||||| || ||||||||||||||| || |||||||||||||
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 56.0 bits (28), Expect = 1e-07
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagtt-g 69
||||||||||||| |||||| || ||||||||||||||| || ||||||||| || |
Sbjct: 102 ctactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaaattag 43
Query: 70 tactaagcttgagacagttattttgggacggagggagtac 109
||| ||| ||||| || |||||||| |||||||||||||
Sbjct: 42 tacaaag-ttgagtcatctattttggaacggagggagtac 4
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||| | ||||||| || ||||||||||||||| || |||||||||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AB239678.1/2131-2247 52163:Triticum monococcum
subsp. aegilopoides
Length = 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgta 49
||||||||||||| |||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaattaagtgactcaactttgta 42
>RF00906;MIR1122;AACV01001520.1/25871-25960 39947:Oryza sativa
Japonica Group
Length = 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 84 cagttattttgggacggagggagtac 109
||||||||||||||||||||||||||
Sbjct: 29 cagttattttgggacggagggagtac 4
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 50.1 bits (25), Expect = 7e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtacta 52
||||| ||| ||| ||||||||||| |||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgactcaactttgtacta 57
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 18 ctccgtctcaaaataagtgtctcaactttgtacta 52
||||||| |||| |||||| |||||||||||||||
Sbjct: 11 ctccgtcccaaagtaagtgactcaactttgtacta 45
>RF00906;MIR1122;FJ581044.1/175385-175266 4538:Oryza glaberrima
(African rice)
Length = 120
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 85 agttattttgggacggagggagtac 109
|||||||||||||||||||||||||
Sbjct: 28 agttattttgggacggagggagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagt 35
||||||||||||||||||||||||
Sbjct: 116 tactccctccgtctcaaaataagt 93
>RF00906;MIR1122;AP008218.1/11741623-11741744 39947:Oryza sativa
Japonica Group
Length = 122
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtacatg 112
|||||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtacatg 122
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 38 ctcaactttgtactagctctagtacaaagttg 69
||||||||||||||| || |||||||||||||
Sbjct: 64 ctcaactttgtactatctttagtacaaagttg 33
>RF00906;MIR1122;AY821733.1/621-487 4568:Triticum monococcum
Length = 135
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 89 attttgggacggagggagtacatg 112
||||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtacatg 1
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagtac 109
||||| || |||||||||||||||||||||||
Sbjct: 81 ttgagtcacttattttgggacggagggagtac 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| ||||||||||| |||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaa 81
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtgtc 38
|||||||||||||| |||||||||||||
Sbjct: 4 ctactccctccgtcccaaaataagtgtc 31
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 69 gtactaagcttgagacagttattttgggacggagggagta 108
||||||| ||| |||| ||||||||||||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtc 38
||||||||||||| |||||||||||||
Sbjct: 102 tactccctccgtcccaaaataagtgtc 76
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gacagttattttgggacggagggagta 108
|||| ||||||||||||||||||||||
Sbjct: 76 gacacttattttgggacggagggagta 102
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 agttattttgggacggagggagta 108
||||||||||||||||||||||||
Sbjct: 133 agttattttgggacggagggagta 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02011966.1/4807-4962 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtacat 111
||||||||||||||||||||||||
Sbjct: 132 tattttgggacggagggagtacat 155
>RF00906;MIR1122;AACV01003177.1/25234-25117 39947:Oryza sativa
Japonica Group
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtacat 111
||||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtacat 2
>RF00906;MIR1122;AAAA02019483.1/16379-16491 39946:Oryza sativa
Indica Group
Length = 113
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 agttattttgggacggagggagta 108
||||||||||||||||||||||||
Sbjct: 86 agttattttgggacggagggagta 109
>RF00906;MIR1122;AACV01003040.1/15315-15426 39947:Oryza sativa
Japonica Group
Length = 112
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtacat 111
||||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtacat 111
>RF01058;MIR806;AACV01004692.1/2655-2900 39947:Oryza sativa Japonica
Group
Length = 246
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagtac 1
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa
Japonica Group
Length = 247
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtgt 37
|||||||||||||| ||||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtgt 27
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01020112.1/46634-46870 39947:Oryza sativa
Japonica Group
Length = 237
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 215 ttattttgggacggagggagtac 237
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02021561.1/35714-35484 39946:Oryza sativa
Indica Group
Length = 231
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataag 34
|||||||||||||||||||||||
Sbjct: 2 tactccctccgtctcaaaataag 24
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 8 tttctactccctccgtctcaaaataagtgtc 38
|||||||| |||||||| |||||||||||||
Sbjct: 110 tttctactacctccgtcccaaaataagtgtc 80
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||||||||||| ||||||||||| |||||
Sbjct: 112 tactccctccgtcccaaaataagtgactcaa 82
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ttgagacagttattttgggacggagggagta 108
||||| || ||||||||||||||||||||||
Sbjct: 82 ttgagtcacttattttgggacggagggagta 112
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtc 38
|||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtatcaaaataagtgtc 31
>RF00906;MIR1122;AY268139.1/69673-69778 4513:Hordeum vulgare
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctcaacttt 46
|||| ||||||||||||||||| ||||| ||||||
Sbjct: 102 tacttcctccgtctcaaaataactgtcttaacttt 68
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtc 38
|||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcttaaaataagtgtc 31
>RF00906;MIR1122;DQ106595.1/374-276 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 22 gtctcaaaataagtgtctcaactttgtacta 52
||||||||||||||| ||||||||||||||
Sbjct: 15 gtctcaaaataagtgattcaactttgtacta 45
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 ttttgggacggagggagtacatg 112
|||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacatg 1
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 90 ttattttgggacggagggagtac 112
>RF00906;MIR1122;AF427791.1/40179-40064 4513:Hordeum vulgare
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaa 42
||||| ||||||||||||||||||| |||||
Sbjct: 5 tactctctccgtctcaaaataagtgactcaa 35
>RF00906;MIR1122;AJ704455.1/466-601 4513:Hordeum vulgare
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 attttgggacggagggagtacat 111
|||||||||||||||||||||||
Sbjct: 113 attttgggacggagggagtacat 135
>RF00906;MIR1122;AF525764.1/1593-1489 200361:Aegilops tauschii
subsp. strangulata
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 58 agtacaaagttgtactaagcttgagacagttattttgggacggagggagta 108
|||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 51 agtacaaagttgtactaaagcaaagacacttattttgggatggagggagta 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tctactccctccgtctcaaaataagtgtct 39
|||||||||||| || ||||||||||||||
Sbjct: 103 tctactccctccatcccaaaataagtgtct 74
>RF00906;MIR1122;AAAA02022195.1/27114-27226 39946:Oryza sativa
Indica Group
Length = 113
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 88 ttattttgggacggagggagtac 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataa 33
||||||||||||||||||||||
Sbjct: 5 tactccctccgtctcaaaataa 26
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 tctactccctccgtctcaaaata 32
|||||||||||||||||||||||
Sbjct: 138 tctactccctccgtctcaaaata 116
>RF00906;MIR1122;AACV01021306.1/37655-37776 39947:Oryza sativa
Japonica Group
Length = 122
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtaca 110
|||||||||||||||||||||||
Sbjct: 98 tattttgggacggagggagtaca 120
>RF00906;MIR1122;AAAA02006215.1/494-605 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtaca 110
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaca 110
>RF00906;MIR1122;AAAA02012151.1/19064-18908 39946:Oryza sativa
Indica Group
Length = 157
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtaca 110
|||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtaca 155
>RF00906;MIR1122;AP003303.4/77673-77577 39947:Oryza sativa Japonica
Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagtac 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02034673.1/6609-6720 39946:Oryza sativa Indica
Group
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtaca 110
|||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtaca 110
>RF00906;MIR1122;AP008209.1/11046117-11046191 39947:Oryza sativa
Japonica Group
Length = 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 ttttgggacggagggagtacatg 112
|||||||||||||||||||||||
Sbjct: 53 ttttgggacggagggagtacatg 75
>RF00906;MIR1122;AP008209.1/27314174-27314047 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtaca 110
|||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtaca 3
>RF00906;MIR1122;AACV01002422.1/2768-2895 39947:Oryza sativa
Japonica Group
Length = 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 ttttgggacggagggagtacatg 112
|||||||||||||||||||||||
Sbjct: 106 ttttgggacggagggagtacatg 128
>RF00906;MIR1122;AP008212.1/6831401-6831305 39947:Oryza sativa
Japonica Group
Length = 97
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagtac 109
|||||||||||||||||||||||
Sbjct: 72 ttattttgggacggagggagtac 94
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 223 ttattttgggacggagggagta 244
>RF01058;MIR806;AAAA02014927.1/5775-5532 39946:Oryza sativa Indica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01000175.1/175-418 39947:Oryza sativa Japonica
Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AP008208.1/24144061-24144300 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02015465.1/824-1069 39946:Oryza sativa Indica
Group
Length = 246
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 246 ctactccctccgtcccaaaataagtg 221
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 224 ttattttgggacggagggagta 245
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtctcaaaataagtg 26
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 241 ctactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01004890.1/11000-11239 39947:Oryza sativa
Japonica Group
Length = 240
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 218 ttattttgggacggagggagta 239
>RF01058;MIR806;AP004672.3/126730-126486 39947:Oryza sativa Japonica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtg 36
||||| ||||||||||||||||||||
Sbjct: 1 ctactacctccgtctcaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 219 ttattttgggacggagggagta 240
>RF01058;MIR806;AAAA02007955.1/54103-53859 39946:Oryza sativa
Indica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaataagtg 36
|||||||||||||| |||||||||||
Sbjct: 1 ctactccctccgtcccaaaataagtg 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 23 ttattttgggacggagggagta 2
>RF00906;MIR1122;AC192352.2/55884-55804 3880:Medicago truncatula
(barrel medic)
Length = 81
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 ctactccctccgtctcaaaata 32
||||||||||||||||||||||
Sbjct: 4 ctactccctccgtctcaaaata 25
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaata 32
||||||||||||||||||||||
Sbjct: 78 ctactccctccgtctcaaaata 57
>RF00906;MIR1122;ABXC01006480.1/93142-93031 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataagtgtctca 41
|||||||||||| ||||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtctca 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 tgagacagttattttgggacggagggagta 108
||||||| ||||||||| ||||||||||||
Sbjct: 101 tgagacacttattttggaacggagggagta 130
>RF00906;MIR1122;AY485644.1/84291-84425 4568:Triticum monococcum
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 89 attttgggacggagggagtaca 110
||||||||||||||||||||||
Sbjct: 24 attttgggacggagggagtaca 3
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 tactccctccgtctcaaaataagtgtctcaactttgtactagctctagtacaaagttg 69
|||||||||||| ||||||| || ||||||||||||||| || |||| |||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 82 gacagttattttgggacggagggagtacat 111
|||| |||||||||||| ||||||||||||
Sbjct: 76 gacacttattttgggaccgagggagtacat 105
>RF00906;MIR1122;AAAA02002553.1/2264-2375 39946:Oryza sativa Indica
Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 88 tattttgggacggagggagtac 109
>RF00906;MIR1122;AAAA02031697.1/13340-13228 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtac 110
>RF00906;MIR1122;AAAA02028442.1/1248-1113 39946:Oryza sativa Indica
Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 111 ttattttgggacggagggagta 132
>RF00906;MIR1122;AP003725.3/107083-106927 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01024885.1/21195-21061 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 111 tattttgggacggagggagtac 132
>RF00906;MIR1122;AAAA02033081.1/3802-3711 39946:Oryza sativa Indica
Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02018379.1/19319-19440 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 97 ttattttgggacggagggagta 118
>RF00906;MIR1122;AC090873.4/89374-89493 4530:Oryza sativa (rice)
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008216.1/15579713-15579809 39947:Oryza sativa
Japonica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 tctactccctccgtctcaaaataagt 35
||||||||||||||| ||||||||||
Sbjct: 3 tctactccctccgtcccaaaataagt 28
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02034725.1/24676-24788 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 89 tattttgggacggagggagtac 110
>RF00906;MIR1122;AAAA02010753.1/12998-13107 39946:Oryza sativa
Indica Group
Length = 110
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 ttttgggacggagggagtacat 111
||||||||||||||||||||||
Sbjct: 88 ttttgggacggagggagtacat 109
>RF00906;MIR1122;AACV01002208.1/17153-17286 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaata 32
||||||||||||||||||||||
Sbjct: 131 ctactccctccgtctcaaaata 110
>RF00906;MIR1122;AACV01020861.1/25006-25108 39947:Oryza sativa
Japonica Group
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 78 ttattttgggacggagggagta 99
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02006623.1/10234-10353 39946:Oryza sativa
Indica Group
Length = 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 96 tattttgggacggagggagtac 117
>RF00906;MIR1122;AP005586.3/39119-39252 39947:Oryza sativa Japonica
Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 110 tattttgggacggagggagtac 131
>RF00906;MIR1122;AP002537.2/68809-68701 39947:Oryza sativa Japonica
Group
Length = 109
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 ttttgggacggagggagtacat 111
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacat 2
>RF00906;MIR1122;CR855136.1/20944-20809 4530:Oryza sativa (rice)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 ctactccctccgtctcaaaata 32
||||||||||||||||||||||
Sbjct: 133 ctactccctccgtctcaaaata 112
>RF00906;MIR1122;AACV01006104.1/16306-16436 39947:Oryza sativa
Japonica Group
Length = 131
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 ttttgggacggagggagtacat 111
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacat 2
>RF00906;MIR1122;AC229754.2/94242-94126 63629:Oryza minuta
Length = 117
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 92 ttattttgggacggagggagta 113
>RF00906;MIR1122;CT832702.1/1285-1384 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 76 tattttgggacggagggagtac 97
>RF00906;MIR1122;AP003267.3/20551-20679 39947:Oryza sativa Japonica
Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 105 tattttgggacggagggagtac 126
>RF00906;MIR1122;AAAA02015207.1/7418-7517 39946:Oryza sativa Indica
Group
Length = 100
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AACV01001981.1/7100-7193 39947:Oryza sativa
Japonica Group
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AL606632.5/91694-91591 4530:Oryza sativa (rice)
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 90 ttttgggacggagggagtacat 111
||||||||||||||||||||||
Sbjct: 23 ttttgggacggagggagtacat 2
>RF00906;MIR1122;AAAA02010499.1/21534-21382 39946:Oryza sativa
Indica Group
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AAAA02016947.1/4733-4836 39946:Oryza sativa Indica
Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AP004994.2/80471-80627 39947:Oryza sativa Japonica
Group
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 133 tattttgggacggagggagtac 154
>RF00906;MIR1122;AACV01013954.1/10702-10856 39947:Oryza sativa
Japonica Group
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 131 tattttgggacggagggagtac 152
>RF00906;MIR1122;AP004256.3/9033-9136 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 85 agttattttgggacggagggagtaca 110
||||||||||||||||||||| ||||
Sbjct: 77 agttattttgggacggagggaataca 102
>RF00906;MIR1122;AP008210.1/24813715-24813809 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 71 tattttgggacggagggagtac 92
>RF00906;MIR1122;AAAA02018626.1/12551-12423 39946:Oryza sativa
Indica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 104 ttattttgggacggagggagta 125
>RF00906;MIR1122;AAAA02026943.1/18413-18317 39946:Oryza sativa
Indica Group
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 tactccctccgtctcaaaataa 33
||||||||||||||||||||||
Sbjct: 93 tactccctccgtctcaaaataa 72
>RF00906;MIR1122;AAAA02018654.1/14883-14772 39946:Oryza sativa
Indica Group
Length = 112
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 25 tattttgggacggagggagtac 4
>RF00906;MIR1122;AC120987.2/63054-63157 39947:Oryza sativa Japonica
Group
Length = 104
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 80 tattttgggacggagggagtac 101
>RF00906;MIR1122;AAAA02006222.1/38105-37993 39946:Oryza sativa
Indica Group
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 ttattttgggacggagggagta 108
||||||||||||||||||||||
Sbjct: 26 ttattttgggacggagggagta 5
>RF00906;MIR1122;AP008209.1/32841988-32841849 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 88 tattttgggacggagggagtac 109
||||||||||||||||||||||
Sbjct: 116 tattttgggacggagggagtac 137
