miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;EU282251.1/1314-1209 52152:Elymus repens
Length = 106
Score = 135 bits (68), Expect = 1e-31
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 9 tactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttat 68
||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| | ||
Sbjct: 5 tactccctccgtcccaaaataagtgtcgcaaatttagtactaagttagtacaaatataat 64
Query: 69 agtaaagcagcgacacttattttggaacggagggagtata 108
| || |||||||||||||||||||| ||||||||||||||
Sbjct: 65 actagagcagcgacacttattttgggacggagggagtata 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 7 tatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaatttt 66
||||||||||| ||||||||||||||| ||| | |||||||| || |||| || ||
Sbjct: 104 tatactccctccgtcccaaaataagtgtcgctgctctagtattatatttgtactaactta 45
Query: 67 atagtaaagcagcgacacttattttggaacggagggagta 106
|| |||| |||||||||||||||| ||||||||||||
Sbjct: 44 gtactaaatttgcgacacttattttgggacggagggagta 5
>RF00906;MIR1122;AK252095.1/1820-1925 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 117 bits (59), Expect = 3e-26
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaatttta 67
|||||||||||||||||||||||||| | |||||||| | ||| |||||||||||||||
Sbjct: 103 atactccctctgtcccaaaataagtgtcacaaatttataactaaattagtacaaatttta 44
Query: 68 tagtaaagcagcgacacttattttggaacggagggagta 106
|| |||| ||||||||||||||||| ||||||||||||
Sbjct: 43 tactaaatcagcgacacttattttgatacggagggagta 5
>RF00906;MIR1122;AK249769.1/2180-2285 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 97.6 bits (49), Expect = 3e-20
Identities = 88/101 (87%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattt 65
|||||||||||| ||| |||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 2 atatactccctccgtcttaaaataagtgtcacaaatttagtattaagttagtataaattt 61
Query: 66 tatagtaaagcagcgacacttattttggaacggagggagta 106
|| |||| |||||||||||||||||| ||| ||| ||||
Sbjct: 62 agtactaaaacagcgacacttattttgggacgaaggaagta 102
>RF00906;MIR1122;DQ900687.1/24296-24401 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 106
Score = 75.8 bits (38), Expect = 1e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattt 65
||||||||||| ||| ||||||||||||||| ||| |||| ||| | |||||||||||
Sbjct: 2 atatactcccttcgtcttaaaataagtgacgcatattcagtactaaatgagtacaaattt 61
Query: 66 tatagtaaagcagcgacacttattttggaacggagggagtat 107
| || || | || ||||||||||||| | |||||||||||||
Sbjct: 62 tgtactagatcaacgacacttattttaggacggagggagtat 103
>RF00906;MIR1122;EF560592.1/17009-17118 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 110
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 65 ttatagtaaagcagcgacacttattttggaacggagggagtatat 109
||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct: 46 ttatactaaatcagcgacacttattttggaacggaaggagtatat 2
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 71 taaagcagcgacacttattttggaacggagggagta 106
|||| |||||||||||||||||| ||||||| ||||
Sbjct: 71 taaatcagcgacacttattttgggacggaggtagta 106
>RF00906;MIR1122;EU282656.1/645-750 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 106
Score = 63.9 bits (32), Expect = 4e-10
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttat 68
||||||||| ||||||||||||||| || ||||||| | || |||||||||||||||
Sbjct: 102 tactccctcggtcccaaaataagtgtcgtaaatttataaccaaactagtacaaattttat 43
Query: 69 agtaaagcagcgacacttattttggaacggagggag 104
| |||| |||||||| |||||| ||||||||||
Sbjct: 42 actaaatgggcgacactcattttgagacggagggag 7
>RF00906;MIR1122;FJ491378.1/4581-4466 4550:Secale cereale (rye)
Length = 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtgacgcaaa 40
|||||||||||||||||||||||||||||| ||||
Sbjct: 2 atatactccctctgtcccaaaataagtgactcaaa 36
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 7 tatactccctctgtcccaaaataagtgacgcaaa 40
||||||||||| ||||||||||||||||| ||||
Sbjct: 114 tatactccctccgtcccaaaataagtgactcaaa 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cacttattttggaacggagggagtata 108
|||||||||||| ||||||||||||||
Sbjct: 88 cacttattttgggacggagggagtata 114
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtgac 35
||||||||||||||||||||||||||||||
Sbjct: 2 atatactccctctgtcccaaaataagtgac 31
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||||||||||||||||||
Sbjct: 31 gacacttattttggaacggagggagtata 3
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||||||||||||||||||
Sbjct: 31 gacacttattttggaacggagggagtata 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 ttattttggaacggagggagtat 107
|||||||||||||||||||||||
Sbjct: 80 ttattttggaacggagggagtat 102
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtat 107
||||||||||||||||||||||||||||
Sbjct: 104 gacacttattttggaacggagggagtat 131
>RF00906;MIR1122;DQ267106.1/62901-62968 4572:Triticum urartu
Length = 68
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataagtgac 35
|||||||||||||||||||||||||||
Sbjct: 64 tactccctctgtcccaaaataagtgac 38
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtatat 109
|||||||||||| |||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtatat 2
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtg 33
|||||||||||| |||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ491378.1/3751-3855 4550:Secale cereale (rye)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 79/95 (83%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 12 tccctctgtcccaaaataagtgacgcaaatttagtattaagttagtacaaattttatagt 71
|||||| ||||||||||||||| | |||||||| ||||||||| ||| || || |
Sbjct: 8 tccctccgtcccaaaataagtgtcattgatttagtacaaagttagtataaagttg-tatt 66
Query: 72 aaagcagcgacacttattttggaacggagggagta 106
||| |||||||||||||||||| |||| |||||||
Sbjct: 67 aaatcagcgacacttattttgggacggcgggagta 101
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagta 106
|||||||||||||||||||||||||||
Sbjct: 31 gacacttattttggaacggagggagta 5
>RF00906;MIR1122;D30809.1/4836-4921 4565:Triticum aestivum (bread
wheat)
Length = 86
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 71 taaagcagcgacacttattttggaacggagggagtata 108
|||| |||||||||||||||||| |||| |||||||||
Sbjct: 47 taaatcagcgacacttattttgggacggtgggagtata 84
>RF00906;MIR1122;AJ507395.1/7785-7899 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 tatactccctctgtcccaaaataagtgacgcaaa 40
|||| |||||||||||||||||||||||| ||||
Sbjct: 3 tataatccctctgtcccaaaataagtgactcaaa 36
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataagtgacgcaaa 40
||||||||| ||||||||||||||||| ||||
Sbjct: 111 tactccctccgtcccaaaataagtgactcaaa 80
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtatat 109
|||||||||||||| |||||||||||||||
Sbjct: 75 gacacttattttgggacggagggagtatat 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 gatatactccctctgtcccaaaataagtg 33
||||||||||||| |||||||||||||||
Sbjct: 105 gatatactccctccgtcccaaaataagtg 77
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagta 106
|||||||||||||| ||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||| ||||||||||||||
Sbjct: 75 gacacttattttgggacggagggagtata 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 7 tatactccctctgtcccaaaataagtg 33
||||||||||| |||||||||||||||
Sbjct: 103 tatactccctccgtcccaaaataagtg 77
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||| ||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagtata 3
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtat 107
|||||||||||||| |||||||||||||
Sbjct: 74 gacacttattttgggacggagggagtat 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tatactccctctgtcccaaaataagtg 33
||||||||||| |||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaataagtg 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 101 atactccctccgtcccaaaataagtg 76
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 7 tatactccctctgtcccaaaataagtgac 35
||||||||||| |||||||||||||||||
Sbjct: 102 tatactccctccgtcccaaaataagtgac 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 cacttattttggaacggagggagtata 108
|||||||||||| ||||||||||||||
Sbjct: 76 cacttattttgggacggagggagtata 102
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||| ||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagtata 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tatactccctctgtcccaaaataagtg 33
||||||||||| |||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtata 108
|||||||||||||| ||||||||||||||
Sbjct: 31 gacacttattttgggacggagggagtata 3
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tatactccctctgtcccaaaataagtg 33
||||||||||| |||||||||||||||
Sbjct: 3 tatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AP008213.1/28683389-28683301 39947:Oryza sativa
Japonica Group
Length = 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 cacttattttggaacggagggagta 106
|||||||||||||||||||||||||
Sbjct: 61 cacttattttggaacggagggagta 85
>RF00906;MIR1122;CU302289.7/103800-103679 3880:Medicago truncatula
(barrel medic)
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtatat 109
||||||||||||||||||||||||
Sbjct: 98 tattttggaacggagggagtatat 121
>RF00906;MIR1122;U29095.1/333-439 4565:Triticum aestivum (bread
wheat)
Length = 107
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtatat 109
|||||||||||| |||||||||||||||
Sbjct: 29 cacttattttgggacggagggagtatat 2
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagtg 33
|||||||||||| |||||||||||||||
Sbjct: 2 atatactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtat 107
|||||||||||||| |||||||||||||
Sbjct: 31 gacacttattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaataagtgac 35
|||||||||| |||||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtgac 31
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
>RF00906;MIR1122;AP008212.1/3593579-3593709 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 atatactccctctgtcccaaaata 29
||||||||||||||||||||||||
Sbjct: 130 atatactccctctgtcccaaaata 107
>RF00906;MIR1122;ABXC01000529.1/263619-263734 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 88 ttttggaacggagggagtatata 110
|||||||||||||||||||||||
Sbjct: 23 ttttggaacggagggagtatata 1
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataagtgac 35
||||| |||||||||||||||||||||
Sbjct: 97 tactcgctctgtcccaaaataagtgac 71
>RF00906;MIR1122;DQ154924.1/3536-3603 4571:Triticum turgidum
Length = 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 44 tattttggaacggagggagtata 66
>RF00906;MIR1122;AB183299.1/312-404 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtatata 110
|||||||||||||| ||||||| ||||||||
Sbjct: 63 gacacttattttgggacggaggaagtatata 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 ctccctctgtcccaaaataagtgacgcaaatttagtat 48
||||||| ||||||||||||||| | ||| ||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttagtat 44
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagtatata 110
|||||||||||| ||||||| ||||||||||
Sbjct: 31 gacacttattttagaacggaaggagtatata 1
>RF00906;MIR1122;AY137517.1/5819-5912 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagta 106
||||||||||||||| |||||||||||
Sbjct: 64 gacacttattttggatcggagggagta 90
>RF00906;MIR1122;AF427791.1/1754-1590 4513:Hordeum vulgare
Length = 165
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtata 108
|||||||||||||||||||||||
Sbjct: 143 tattttggaacggagggagtata 165
>RF00906;MIR1122;AF181455.1/3108-2994 4513:Hordeum vulgare
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataagtgac 35
||||||||| |||||||||||||||||
Sbjct: 111 tactccctccgtcccaaaataagtgac 85
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagta 106
|||||||||||||| ||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 80 gacacttattttggaacggagggagta 106
|||||||||||||| ||||||||||||
Sbjct: 31 gacacttattttgggacggagggagta 5
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagta 106
|||||||||||||| ||||||||||||
Sbjct: 75 gacacttattttgggacggagggagta 101
>RF00906;MIR1122;EU730897.1/72285-72181 15368:Brachypodium
distachyon
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtatata 110
|||||||||| |||| |||||||||||||||
Sbjct: 75 gacacttattatggatcggagggagtatata 105
>RF00906;MIR1122;AAAA02021906.1/16695-16573 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaataa 30
|||||||||||||||||||||||
Sbjct: 120 atactccctctgtcccaaaataa 98
>RF00906;MIR1122;AAAA02008325.1/22579-22685 39946:Oryza sativa
Indica Group
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 7 tatactccctctgtcccaaaataagtg 33
||||||||||||||||||| |||||||
Sbjct: 3 tatactccctctgtcccaatataagtg 29
>RF00906;MIR1122;AP004740.3/39878-39774 39947:Oryza sativa
Japonica Group
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 atatactccctctgtcccaaaataagt 32
||||||| |||||||||||||||||||
Sbjct: 2 atatacttcctctgtcccaaaataagt 28
>RF01058;MIR806;AP008208.1/6823788-6823544 39947:Oryza sativa
Japonica Group
Length = 245
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 245 atactccctccgtcccaaaataagtg 220
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 220 cacttattttgggacggagggagtat 245
>RF01058;MIR806;AL731615.4/103346-103100 39947:Oryza sativa Japonica
Group
Length = 247
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 81 acacttattttggaacggagggagta 106
||||||||||||| ||||||||||||
Sbjct: 27 acacttattttgggacggagggagta 2
>RF01058;MIR806;AACV01008707.1/8338-8098 39947:Oryza sativa
Japonica Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaata 29
||||||||||||||||||||||
Sbjct: 1 atactccctctgtcccaaaata 22
>RF01058;MIR806;AACV01025022.1/35011-35254 39947:Oryza sativa
Japonica Group
Length = 244
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AC136971.3/14967-14725 39947:Oryza sativa Japonica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaata 29
||||||||||||||||||||||
Sbjct: 243 atactccctctgtcccaaaata 222
>RF01058;MIR806;AAAA02004537.1/25464-25706 39946:Oryza sativa Indica
Group
Length = 243
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 26 cacttattttgggacggagggagtat 1
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 1 atactccctccgtcccaaaataagtg 26
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 241 atactccctccgtcccaaaataagtg 216
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 216 cacttattttgggacggagggagtat 241
>RF00906;MIR1122;AC152348.7/114834-114678 3880:Medicago truncatula
(barrel medic)
Length = 157
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 133 tattttggaacggagggagtat 154
>RF00906;MIR1122;AC140029.19/78088-78242 3880:Medicago truncatula
(barrel medic)
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 131 tattttggaacggagggagtat 152
>RF00906;MIR1122;EU660899.1/111846-111744 4567:Triticum turgidum
subsp. durum (durum wheat)
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;DQ890018.1/183-48 77009:Hordeum vulgare subsp.
spontaneum
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 attttggaacggagggagtata 108
||||||||||||||||||||||
Sbjct: 24 attttggaacggagggagtata 3
>RF00906;MIR1122;AY821690.1/1219-1313 4485:Aegilops comosa
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 79 cgacacttattttggaacggagggagtata 108
|||| ||||||||||| |||||||||||||
Sbjct: 32 cgacgcttattttggatcggagggagtata 3
>RF00906;MIR1122;EF059989.1/239319-239424 29664:Brachypodium
sylvaticum
Length = 106
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 77 agcgacacttattttggaacggagggagta 106
||||||||||||| |||| |||||||||||
Sbjct: 34 agcgacacttattatggatcggagggagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 agcgacacttattttggaacggagggagta 106
||||||||||||| |||| |||||||||||
Sbjct: 73 agcgacacttattatggatcggagggagta 102
>RF00906;MIR1122;EU730902.1/9047-9151 15368:Brachypodium distachyon
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gacacttattttggaacggagggagtatat 109
|||||||||| |||| ||||||||||||||
Sbjct: 75 gacacttattatggatcggagggagtatat 104
>RF00906;MIR1122;EU730894.1/50807-50703 15368:Brachypodium
distachyon
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 78 gcgacacttattttggaacggagggagtat 107
||||||||||||||||| |||||| |||||
Sbjct: 33 gcgacacttattttggatcggaggtagtat 4
>RF00906;MIR1122;AACV01004030.1/351-512 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaata 29
||||||||||||||||||||||
Sbjct: 4 atactccctctgtcccaaaata 25
>RF00906;MIR1122;AAAA02034559.1/3133-3272 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AAAA02000966.1/612-453 39946:Oryza sativa Indica
Group
Length = 160
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 85 ttattttggaacggagggagtatata 110
||||||||| ||||||||||||||||
Sbjct: 26 ttattttgggacggagggagtatata 1
>RF00906;MIR1122;AP008214.1/14410723-14410632 39947:Oryza sativa
Japonica Group
Length = 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 cacttattttggaacggagggagtat 107
|||||||||||| |||||||||||||
Sbjct: 29 cacttattttgggacggagggagtat 4
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaataagtg 33
|||||||||| |||||||||||||||
Sbjct: 4 atactccctccgtcccaaaataagtg 29
>RF00906;MIR1122;AACV01008275.1/11041-11180 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AP005108.2/31586-31696 39947:Oryza sativa Japonica
Group
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 85 ttattttggaacggagggagtatata 110
||||||||| ||||||||||||||||
Sbjct: 86 ttattttggtacggagggagtatata 111
>RF00906;MIR1122;AACV01009606.1/13757-13637 39947:Oryza sativa
Japonica Group
Length = 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 tactccctctgtcccaaaataa 30
||||||||||||||||||||||
Sbjct: 117 tactccctctgtcccaaaataa 96
>RF00906;MIR1122;AACV01015822.1/5399-5292 39947:Oryza sativa
Japonica Group
Length = 108
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 8 atactccctctgtcccaaaata 29
||||||||||||||||||||||
Sbjct: 4 atactccctctgtcccaaaata 25
>RF00906;MIR1122;AACV01008813.1/4556-4689 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 25 tattttggaacggagggagtat 4
>RF00906;MIR1122;AP008209.1/34516197-34516103 39947:Oryza sativa
Japonica Group
Length = 95
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 tattttggaacggagggagtat 107
||||||||||||||||||||||
Sbjct: 71 tattttggaacggagggagtat 92
