miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>54697_tae-miR1122:pmrd
          Length = 295

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 8   acttatactctctccgtcccagaatncttgtcttagatt 46
           |||||||||| |||||||||| ||| |||||||||||||
Sbjct: 156 acttatactccctccgtcccaaaattcttgtcttagatt 118




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 12  atactctctccgtcccagaatncttgtcttagatttg 48
           |||||| |||||||||| ||| || ||||||||||||
Sbjct: 155 atactccctccgtcccaaaattctngtcttagatttg 119