miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 121 bits (61), Expect = 3e-27
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctcaaatttgtactagctctagtacaaagttgta 64
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||| ||||||||| | |||||| |||||
Sbjct: 65 ctaagcttgagatagttattttggaacggagggagta 101
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 111 bits (56), Expect = 3e-24
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 56 ccaaaataagtgtcttaactttgtactagctctagtacaaagttgtattaagctttagac 115
||||||||||||||| ||||||||||||| ||||||||||||||||| || |||| ||||
Sbjct: 88 ccaaaataagtgtctcaactttgtactagttctagtacaaagttgtactaggcttgagac 29
Query: 116 agttattttaggacggagagagta 139
||||||||| |||||||| |||||
Sbjct: 28 agttattttgggacggagtgagta 5
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 54 ttccaaaataagtgtcttaactttgtactagctctagtacaaagttgtattaagctttag 113
||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 90 ttccaaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgag 31
Query: 114 acagttatttt 124
|||||||||||
Sbjct: 30 acagttatttt 20
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 109 bits (55), Expect = 1e-23
Identities = 88/99 (88%)
Strand = Plus / Minus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgt 101
||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 102 gtactccctccgtcccaaaataagtgtcttaactttgtactaactttagtacaaagttgt 43
Query: 102 attaagctttagacagttattttaggacggagagagtac 140
| || |||| ||||| ||||||| ||||||| ||||||
Sbjct: 42 actaggcttgagacacttattttgagacggagggagtac 4
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||| | ||| ||||||||||||||| |||||| |||||||| ||||||||| |||||
Sbjct: 5 tactccatccgtcccaaaataagtgtctcaactttatactagctatagtacaaacttgta 64
Query: 103 ttaagctttagacagttattttaggacggagagagtac 140
||||| || ||||||||||||| |||||||| ||||||
Sbjct: 65 ttaagtttgagacagttattttgggacggagggagtac 102
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 101 bits (51), Expect = 3e-21
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| |||||||| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 101 tactccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgta 42
Query: 103 ttaagctttagacagttattttaggac 129
||||||| ||||| ||||||||||||
Sbjct: 41 ctaagcttaagacacttattttaggac 15
>RF00906;MIR1122;DQ175992.1/50-154 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||| |||||||||||||| |||||||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattata 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||||| |||||||| ||||||||||||
Sbjct: 41 ctaagcttaagacacttattttaaaacggagagagta 5
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||| || |
Sbjct: 101 tactccctccgtcccaaaataagtgtctcaactttgtactagctgtagtacaaaattaca 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||||| ||||||| |||||||| |||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||| ||||| ||||||||| || || |||||||||||||||
Sbjct: 101 tactccctccgtcccaaaataaatgtctcaactttgtattaactttagtacaaagttgta 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||||| ||||||| |||||||| |||||
Sbjct: 41 ctaagcttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 40 ttgtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagtt 99
||||||||||| | | ||||||||||||||| |||||||||||| |||||||||||| ||
Sbjct: 104 ttgtactccctccatcccaaaataagtgtctcaactttgtactatctctagtacaaattt 45
Query: 100 gtattaagctttagacagttattttaggacggagagagta 139
|| |||||| ||||| ||||||| |||||||| |||||
Sbjct: 44 ttactaagctcaagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 93.7 bits (47), Expect = 8e-19
Identities = 86/99 (86%)
Strand = Plus / Minus
Query: 41 tgtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||| |||
Sbjct: 103 tgtactccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattg 44
Query: 101 tattaagctttagacagttattttaggacggagagagta 139
|| || ||| ||||| ||||||| | |||||| |||||
Sbjct: 43 tactacgctcaagacacttattttggaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtctt 71
|||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtctt 33
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 101 tactccctccgtttcaaaataaatgtctcaactttgtactagctctagtacaaagttgta 42
Query: 103 ttaagc 108
|||||
Sbjct: 41 ctaagc 36
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 91.7 bits (46), Expect = 3e-18
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgt 101
||||||||| | | ||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 101 gtactccctccatcccaaaataactgtctcaactttgtactagctctagtacaaagttgt 42
Query: 102 attaagctttagacagttattttaggacggagagagta 139
| ||| || ||||||||||||| ||||||| |||||
Sbjct: 41 acaaag-ttgagacagttattttgagacggagggagta 5
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||| ||||| |||||| |||||| ||||||| ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctagtataaatttata 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||||||||||||| |||||||| |||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 41 tgtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||||| ||| ||| ||||||||| ||||| ||||||||| ||| | ||||||||| |||
Sbjct: 103 tgtacttcctccgtcccaaaataactgtctcaactttgtattagatttagtacaaaattg 44
Query: 101 tattaagctttagacagttattttaggacggagagagta 139
|||||||||| ||||| ||||||| | |||||| |||||
Sbjct: 43 tattaagcttaagacacttattttggaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaa 73
|||||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaaataagtgtcttaa 35
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| |||||||| |||||||||||||||||||||| ||| ||| |||||
Sbjct: 101 tactccctccgtcccaaaatatctgtcttaactttgtactagctcatgtataaaattgta 42
Query: 103 ttaagctttagacagttattttaggacggag 133
||||||| ||||| ||||||| ||||||||
Sbjct: 41 ctaagcttaagacacttattttgggacggag 11
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| |||||||||| ||| |||||| ||||||||||||| |||||||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcaactttacactagctctagtataaagttgta 42
Query: 103 ttaagctttagacagttattttaggacggagagagtact 141
|||| || ||| ||||||||| |||||||| |||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagtact 3
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgt 101
||||||| | ||| ||||||||||||||| || ||| |||| |||||||||||||||||
Sbjct: 4 gtactccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgt 63
Query: 102 attaagctttagacagttattttaggacggagagagta 139
| |||| || ||||| ||||||| |||||||| |||||
Sbjct: 64 actaaggttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 8e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 57 caaaataagtgtcttaactttgtactagctctagtacaaagttgtattaagctttagaca 116
|||||||| ||||| ||| ||||||||||||||||||||| ||||| |||| || |||||
Sbjct: 87 caaaataactgtctcaacattgtactagctctagtacaaaattgtactaagattaagaca 28
Query: 117 gttattttaggacggagagagtacta 142
||||||| ||||||| ||||||||
Sbjct: 27 cttattttgagacggagggagtacta 2
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 81.8 bits (41), Expect = 3e-15
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||||||||| | |||||||||| |||||||| ||| |||||
Sbjct: 100 tactccctccgtcccaaaataagtgtctca-ctttgtactaactctagtataaaattgta 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
|||| || ||||| ||||||| |||||||| |||||
Sbjct: 41 ctaaggttgagacacttattttgggacggagggagta 5
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgt 101
||||||||| |||||||||||| ||||||||||||||||||||| || || ||| || |
Sbjct: 4 gtactccctctgttccaaaataactgtcttaactttgtactagctttactataaatttat 63
Query: 102 attaagctttagacagttattttaggacggagagagtacta 142
| |||| || ||||| ||||||| ||||||| ||||||||
Sbjct: 64 actaagtttaagacatttattttgcgacggagggagtacta 104
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||| ||||| |||||| |||||| |||| || ||| || ||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaactttatactagatctaatataaatttata 42
Query: 103 ttaagctttagacagttattttaggacggagagagta 139
||||||| ||||||||||||| |||||||| |||||
Sbjct: 41 ctaagcttaagacagttattttgggacggagggagta 5
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| |||||||||| ||| | |||| ||||||||||||| |||||||||
Sbjct: 101 tactccctccgtctcaaaataagtatctcagctttacactagctctagtataaagttgta 42
Query: 103 ttaagctttagacagttattttaggacggagagagtact 141
|||| || ||| ||||||||| |||||||| |||||||
Sbjct: 41 ctaagtttgagaaagttattttgggacggagggagtact 3
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| | | ||||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 108 tactccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgta 49
Query: 103 ttaagct 109
||||||
Sbjct: 48 ctaagct 42
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 45 ctcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||| ||| ||||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct: 7 ctccctccgtcccaaaataagtgtctcaactttgtactagctttaatacaaagttgta 64
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 67.9 bits (34), Expect = 5e-11
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| | | ||||||||||||| |||| |||||| ||||| ||||| |||||| ||
Sbjct: 101 tactccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttata 42
Query: 103 ttaagctttagacagttattttaggacgga 132
|||| || ||||| ||||||||| |||||
Sbjct: 41 ctaagattgagacacttattttagaacgga 12
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||||| ||||| || ||||||||| || |||||||||||||||
Sbjct: 149 tactccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgta 90
Query: 103 ttaag 107
||||
Sbjct: 89 ctaag 85
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 67 gtcttaactttgtactagctctagtacaaagttgtattaagctttagacagttattttag 126
|||| |||||||||||| | |||| |||||||||| |||| || ||||| ||||||| |
Sbjct: 77 gtctcaactttgtactaaatttagtgcaaagttgtactaaggttgagacacttattttgg 18
Query: 127 gacg 130
||||
Sbjct: 17 gacg 14
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 45 ctcccttcgttccaaaataagtgtct 70
|||||||||| |||||||||||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtct 32
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 61.9 bits (31), Expect = 3e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttgta 102
|||||||| ||| ||||||| |||||| |||||| |||||||||||| |||||||||
Sbjct: 5 tactccctccgtctcaaaataggtgtctcaactttaccctagctctagtataaagttgta 64
Query: 103 ttaagctttagacagttattttaggac 129
|||| || ||| ||||||||| ||||
Sbjct: 65 ctaagtttgagaaagttattttgggac 91
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
||||||||| ||| ||||| |||||| || |||||| ||||| || |||||||||||||
Sbjct: 91 gtactccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagttg 33
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||||||| | |||||||||| || || |||||||||||| || |||||||||||||
Sbjct: 90 tactccctccattccaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;AF521177.1/81577-81474 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtacta 83
|||||||| ||| |||||||||||| || ||||||||||||
Sbjct: 100 tactccctccgtcccaaaataagtgactcaactttgtacta 60
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtacta 83
|||||||| ||| |||||||||||| || ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgactcaactttgtacta 45
>RF00906;MIR1122;AB182945.1/6773-6906 4565:Triticum aestivum (bread
wheat)
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtct 70
|||||||| |||||||||||||||||||
Sbjct: 130 tactccctccgttccaaaataagtgtct 103
>RF00906;MIR1122;AACV01008110.1/23533-23408 39947:Oryza sativa
Japonica Group
Length = 126
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 42 gtactcccttcgttccaaaataa 64
|||||||||||||||||||||||
Sbjct: 123 gtactcccttcgttccaaaataa 101
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||||||| ||||| |||||| | || |||||||||||| || |||||||||||||
Sbjct: 90 tactccctccgttctaaaatagacgactcaactttgtactatctttagtacaaagttg 33
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||| ||| |||| ||||||| || || |||||||||||| || |||||||||||||
Sbjct: 90 tacttcctccgtttcaaaatagatgactcaactttgtactaactttagtacaaagttg 33
>RF00906;MIR1122;DQ537335.1/8332-8425 4565:Triticum aestivum (bread
wheat)
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaagttg 100
|||||||| |||||||||||| || || |||||||||||| || |||| |||||||
Sbjct: 5 tactccctccgttccaaaatagatgactcaactttgtactaactttagtgtaaagttg 62
>RF00906;MIR1122;AK250735.1/291-376 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 86
Score = 44.1 bits (22), Expect = 7e-04
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 43 tactcccttcgttccaaaataagtgtct-taactttgtacta 83
|||||||| ||| ||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctccaactttgtacta 46
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 42 gtactcccttcgttccaaaataagtgtcttaactttgtacta 83
||||||||| |||||||||||| || || ||||||||||||
Sbjct: 4 gtactccctccgttccaaaatagatgactcaactttgtacta 45
Score = 44.1 bits (22), Expect = 7e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 43 tactcccttcgttccaaaataagtgtcttaactttgtactagctctagtacaaa 96
|||||||| ||||| |||||| || || |||||||||||| || |||||||||
Sbjct: 101 tactccctccgttctaaaatagatgactcaactttgtactaactatagtacaaa 48
