miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AJ302096.1/1385-1477 4573:Aegilops speltoides
Length = 93
Score = 85.7 bits (43), Expect = 1e-16
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttaga-tactaaagtaatgatctanacact 69
||||||||||||| || |||||||||||||||||| ||||||| || ||||||| || ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaatactaaaatagtgatctaaacgct 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtanac-aatataagagcgtttagat 46
|||||||||| ||| || |||||||||||||||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcgtttagat 40
>RF00906;MIR1122;EU183492.1/3479-3389 37682:Aegilops tauschii
Length = 91
Score = 83.8 bits (42), Expect = 4e-16
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 39 gtttagat-actaaagtaatgatctanacactcttatatttctttacagagggagta 94
|||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 31 gtttagatcactaaagtagtgatctaaacactcttatatttctttacagagggagta 87
>RF00906;MIR1122;DQ995513.1/14600-14508 4513:Hordeum vulgare
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 59/64 (92%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||||||||| ||| ||||| ||||||| || |||||||||||||||||||
Sbjct: 22 aatataagagcgtttagatcactgaagtagtgatctaaacgctcttatatttctttacag 81
Query: 87 aggg 90
||||
Sbjct: 82 aggg 85
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||||||||| |||| | ||||||| || |||||||||||||||||||
Sbjct: 72 aatataagagcgtttagatcactacttcagtgatctaaacgctcttatatttctttacag 13
Query: 87 agggagta 94
||| ||||
Sbjct: 12 aggtagta 5
>RF00906;MIR1122;FM164415.1/12272-12364 4513:Hordeum vulgare
Length = 93
Score = 81.8 bits (41), Expect = 2e-15
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||| ||||| ||||||||| | ||||| |||||||||||||||||||| |
Sbjct: 22 aatataagagcgtctagatcactaaagtagttatctaaacactcttatatttctttacgg 81
Query: 87 agggagta 94
||||||||
Sbjct: 82 agggagta 89
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanacaa-tataagagcgtttagata-ctaaagtaatgatctanacact 69
||||||||||||| | || |||||||| ||||||||| ||| || ||||||| || ||
Sbjct: 89 tactccctccgtaaagaaatataagagtgtttagataactactttagtgatctagacgct 30
Query: 70 cttatatttctttacagagggagta 94
|||||||||||||||||| ||||||
Sbjct: 29 cttatatttctttacagaaggagta 5
>RF00906;MIR1122;AF488415.1/103662-103754 4568:Triticum monococcum
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 15 tccctccgtanac-aatataagagcgtttaga-tactaaagtaatgatctanacactctt 72
|||||||||| || |||||||||||||||||| |||||||||||||||||| | || ||
Sbjct: 8 tccctccgtaaactaatataagagcgtttagaatactaaagtaatgatctaaatgctttt 67
Query: 73 atatttctttacagagggagta 94
||||| |||||| ||||||||
Sbjct: 68 atattagtttacaaagggagta 89
>RF00906;MIR1122;AB298185.1/20826-20734 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 71.9 bits (36), Expect = 2e-12
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtanac-aatataagagcgtttaga-tactaaagtaatgatctanacac 68
|||||||||||||| || ||||||| |||||||||| ||||||| || ||||||| ||
Sbjct: 4 gtactccctccgtaaactaatataaaagcgtttagaatactaaaatagtgatctaaacgt 63
Query: 69 tcttatatttctttacagagggagta 94
||||||||| |||||||||||||||
Sbjct: 64 tcttatattagtttacagagggagta 89
>RF00906;MIR1122;AM932685.1/163196-163288 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 69.9 bits (35), Expect = 6e-12
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||| ||| || |||||||||||| |||||| ||||||||| ||||||| | ||
Sbjct: 89 tactccctctgtaaactaatataagagcgcttagatcactaaagtagtgatctaagcgct 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||| ||| || |||||||||||| |||||| |||| || ||||||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgcttagatcactactttagtgatctaagcgct 64
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 65 cttatattagtttacagagggagta 89
>RF00906;MIR1122;AY368673.1/832-740 4571:Triticum turgidum
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 73/84 (86%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 13 actccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacactc 70
|||||||| ||| || ||||||||||||||||||| |||||| || ||||| | ||||||
Sbjct: 88 actccctcagtaaactaatataagagcgtttagatcactaaaatagtgatcaaaacactc 29
Query: 71 ttatatttctttacagagggagta 94
||||||| ||||| |||||||||
Sbjct: 28 ttatattaatttacggagggagta 5
>RF00906;MIR1122;X83518.1/7623-7532 4513:Hordeum vulgare
Length = 92
Score = 67.9 bits (34), Expect = 2e-11
Identities = 61/68 (89%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||| ||| || ||||||||||||||||||| ||||||||| ||||||| || ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagatcactaaagtagtgatctaaacgct 64
Query: 70 cttatatt 77
||||||||
Sbjct: 65 cttatatt 72
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||||||||| |||| || ||||||| || |||||||||| |||||||
Sbjct: 72 aatataagagcgtttagatcactactttagtgatctaaacgctcttatattagtttacag 13
Query: 87 agggagta 94
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;X65606.1/2347-2255 4513:Hordeum vulgare
Length = 93
Score = 67.9 bits (34), Expect = 2e-11
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 9 atgtactccctccgtanacaa-tataagagcgtttagat-actaaagtaatgatctanac 66
|||||||||||||||| | || ||||||| |||||||| ||||||||| | ||||| |
Sbjct: 2 atgtactccctccgtacagaaatataagaatgtttagatcactaaagtagttatctaaat 61
Query: 67 actcttatatttctttacagagggagta 94
||||||||||||||||||||||||||
Sbjct: 62 gatcttatatttctttacagagggagta 89
Score = 46.1 bits (23), Expect = 9e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 57 tgatctanacactcttatatttctttacagagggagta 94
||||||| ||| |||||||||||| ||| |||||||||
Sbjct: 42 tgatctaaacattcttatatttctgtacggagggagta 5
>RF00906;MIR1122;AY747601.1/4943-5034 4565:Triticum aestivum
(bread wheat)
Length = 92
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
|||||||||||||| |||| ||| ||||| ||| ||| || ||||||||||||||||| |
Sbjct: 72 aatataagagcgttcagatcactcaagtagtgacctaaacgctcttatatttctttacgg 13
Query: 87 agggagta 94
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;EU660903.1/5594-5502 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
|||||||||||||||||| ||||||||| | ||||| | |||||||||||||||| ||
Sbjct: 22 aatataagagcgtttagagcactaaagtagttatctaaatgctcttatatttctttatag 81
Query: 87 agggagta 94
||||||||
Sbjct: 82 agggagta 89
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagata-ctaaagtaatgatctanacactcttatatttctttacag 86
||||||||||| |||||||| ||| || || |||| || ||||||||||||||||| |
Sbjct: 72 aatataagagcatttagataactactttagtgctctaaacgctcttatatttctttaccg 13
Query: 87 agggagta 94
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;EU200767.1/3655-3563 37682:Aegilops tauschii
Length = 93
Score = 65.9 bits (33), Expect = 1e-10
Identities = 72/83 (86%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtanacaa-tataagagcgtttagata-ctaaagtaatgatctanacac 68
|||||||||| ||| |||| |||||| |||||||||| ||||| || ||||||| || |
Sbjct: 4 gtactccctctgtaaacaaatataagggcgtttagatctctaaaatagtgatctaaacgc 63
Query: 69 tcttatatttctttacagaggga 91
|||||||||||||||| ||||||
Sbjct: 64 tcttatatttctttactgaggga 86
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||||||||| |||| || |||||| || | ||||||||| |||||||
Sbjct: 72 aatataagagcgtttagatcactattttagagatctaaacgcccttatatttgtttacag 13
Query: 87 agggagta 94
||||||||
Sbjct: 12 agggagta 5
>RF00906;MIR1122;AM932680.1/146155-146063 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 63.9 bits (32), Expect = 4e-10
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 11 gtactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacac 68
|||||||||||||| || ||||||||||||||||| | |||||| || ||||||| | |
Sbjct: 4 gtactccctccgtaaactaatataagagcgtttaggtcactaaaatagtgatctaaatgc 63
Query: 69 tcttatatttctttacagagggagta 94
||||||||| |||||||||| ||||
Sbjct: 64 tcttatattagtttacagaggaagta 89
>RF00906;MIR1122;AF277253.1/801-887 58935:Australopyrum velutinum
Length = 87
Score = 63.9 bits (32), Expect = 4e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 56 atgatctanacactcttatatttctttacagagggagta 94
|||||||| || |||||||||||||||||||||||||||
Sbjct: 43 atgatctaaacgctcttatatttctttacagagggagta 5
Score = 61.9 bits (31), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 57 tgatctanacactcttatatttctttacagagggagta 94
||||||| || |||||||||||||||||||||||||||
Sbjct: 46 tgatctaaacgctcttatatttctttacagagggagta 83
>RF00906;MIR1122;DQ885765.1/4441-4533 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanacaa-tataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||||||| | || ||||||||| ||||||| ||||||||| |||||| | ||
Sbjct: 89 tactccctccgtaaagaaatataagagcatttagatcactaaagtagtgatctgaatgct 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 ctcttatatttctttacagagggagta 94
||||||||||||||||| |||||||||
Sbjct: 63 ctcttatatttctttacggagggagta 89
>RF00906;MIR1122;EU660896.1/71755-71663 4572:Triticum urartu
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||||||| || |||||||||||||||||| |||| || ||||||| |||||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagaacactattttagtgatctaaacact 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||| ||||||||||
Sbjct: 29 cttatattggtttatagagggagta 5
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/69 (85%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 27 caatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttaca 85
||||||||||| |||||||| |||||| || || |||| || |||||||||| |||||
Sbjct: 21 caatataagagtgtttagatcactaaaatagtgttctaaacgctcttatattagtttacg 80
Query: 86 gagggagta 94
|||||||||
Sbjct: 81 gagggagta 89
>RF00906;MIR1122;AJ400713.1/2799-2707 4565:Triticum aestivum
(bread wheat)
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||||||| || ||||||||||||||||||| |||| || ||||||| | ||
Sbjct: 89 tactccctccgtaaactaatataagagcgtttagattactattttagtgatctaaatgct 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||| ||| || ||||||||||| ||||||| |||||| || | ||||| || ||
Sbjct: 5 tactccctctgtaaactaatataagagcatttagatcactaaaatagtaatctaaacgct 64
Query: 70 cttatatttctttacagagggagta 94
|||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttacggagggagta 89
>RF00906;MIR1122;FJ436985.1/28643-28733 4565:Triticum aestivum
(bread wheat)
Length = 91
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtanac-aatataagagcgtttagatactaaagtaatgatctanacact 69
|||||||||||||| || ||||||| |||||||||| |||| || | ||||| |||||
Sbjct: 88 gtactccctccgtaaactaatataatagcgtttaga-actattttagttatctaaacact 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| |||||||||||||||
Sbjct: 29 cttatattagtttacagagggagta 5
>RF00906;MIR1122;AJ507214.1/4285-4377 4513:Hordeum vulgare
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
|||||||||| || ||||| ||||||||| ||||||| || ||||||||||| |||||||
Sbjct: 72 aatataagagtgtctagatcactaaagtagtgatctaaacgctcttatatttgtttacag 13
Query: 87 ag 88
||
Sbjct: 12 ag 11
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttcttt 82
||||||||||||||||||| |||| || ||||||| ||||||||||||||||||
Sbjct: 22 aatataagagcgtttagatcactactttagtgatctagacactcttatatttcttt 77
>RF00906;MIR1122;FJ436986.1/53497-53587 37682:Aegilops tauschii
Length = 91
Score = 61.9 bits (31), Expect = 1e-09
Identities = 73/85 (85%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtanac-aatataagagcgtttagatactaaagtaatgatctanacact 69
|||||||||||||| || |||||||||||||||||| |||| || | ||||| |||||
Sbjct: 88 gtactccctccgtaaactaatataagagcgtttaga-actattttagttatctaaacact 30
Query: 70 cttatatttctttacagagggagta 94
||||||| |||||||||||||||
Sbjct: 29 tttatattagtttacagagggagta 5
>RF00906;MIR1122;AY133248.1/2807-2899 37682:Aegilops tauschii
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 30 tataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacagag 88
||||||||||||||||| ||||||||| | ||||| || |||||||||| ||||| |||
Sbjct: 70 tataagagcgtttagatcactaaagtagtaatctaaacgctcttatattaatttacggag 11
Query: 89 ggagta 94
||||||
Sbjct: 10 ggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttaga-tactaaagtaatgatctanacact 69
||||||||||||| | |||||||||||||||||| ||||| || ||||||| || ||
Sbjct: 5 tactccctccgtaaattaatataagagcgtttagattactactttagtgatctaaacgct 64
Query: 70 cttatatttctttacagagggagta 94
|||||| | |||||||| ||||||
Sbjct: 65 cttatagtagtttacagacggagta 89
>RF00906;MIR1122;EU835198.1/56667-56575 85692:Triticum turgidum
subsp. dicoccoides
Length = 93
Score = 60.0 bits (30), Expect = 6e-09
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 46 tactaaagtaatgatctanacactcttatatttctttacagagggagta 94
||||||| || ||||||| ||||||||||||| |||||||||||||||
Sbjct: 53 tactaaactagtgatctaaacactcttatattagtttacagagggagta 5
>RF00906;MIR1122;EF540321.1/152068-151976 4571:Triticum turgidum
Length = 93
Score = 58.0 bits (29), Expect = 2e-08
Identities = 74/87 (85%), Gaps = 2/87 (2%)
Strand = Plus / Minus
Query: 10 tgtactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanaca 67
||||||||||| ||| || ||||||| | | ||||||| ||||||||| | ||||| |||
Sbjct: 91 tgtactccctctgtaaactaatataaaaacatttagatcactaaagtagtaatctaaaca 32
Query: 68 ctcttatatttctttacagagggagta 94
|||||||||| ||||| |||||||||
Sbjct: 31 ctcttatattagtttacggagggagta 5
>RF00906;MIR1122;EU282300.1/610-519 97361:Hordeum murinum
Length = 92
Score = 56.0 bits (28), Expect = 9e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagatactaaagtaatgatctanacactcttatatttctttacaga 87
||||||| ||||||||||| | ||||| ||||||| | |||||||||| ||||||||
Sbjct: 22 aatataaaagcgtttagatcattaagtagtgatctaaatgctcttatattagtttacaga 81
Query: 88 gggagta 94
|||||||
Sbjct: 82 gggagta 88
>RF00906;MIR1122;AB178167.1/826-734 4565:Triticum aestivum (bread
wheat)
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||| ||| || ||||||||||| |||| || | |||| || ||||||| |||||
Sbjct: 89 tactccctcggtaaactaatataagagcatttaaatcattaaaatagtgatctaaacact 30
Query: 70 cttatatttctttacagagggagta 94
|||||||| ||||| |||||||||
Sbjct: 29 cttatattagtttacggagggagta 5
Score = 46.1 bits (23), Expect = 9e-05
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||||||| || |||||||||| |||||||| |||| ||||||| || | ||
Sbjct: 5 tactccctccgtaaactaatataagagtgtttagatcactattttaatgatttaaatgct 64
Query: 70 cttatatttctttacagagggagta 94
|||||||| ||||| |||||||||
Sbjct: 65 cttatattagtttaccgagggagta 89
>RF00906;MIR1122;DQ537336.1/26726-26824 4565:Triticum aestivum
(bread wheat)
Length = 99
Score = 54.0 bits (27), Expect = 4e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 57 tgatctanacactcttatatttctttacagagggagta 94
||||||| || ||||||||||||||||||||||||||
Sbjct: 42 tgatctaaacgatcttatatttctttacagagggagta 5
>RF00906;MIR1122;AM000057.1/1342-1250 4513:Hordeum vulgare
Length = 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 72/85 (84%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 12 tactccctccgtanac-aatataagagcgtttaga-tactaaagtaatgatctanacact 69
||||||||| ||| || |||||||||||||||||| |||||||||| || |||| | ||
Sbjct: 5 tactccctctgtaaactaatataagagcgtttagattactaaagtagtgttctaaatgct 64
Query: 70 cttatatttctttacagagggagta 94
||||||| ||||||| |||||||
Sbjct: 65 tttatattagtttacagggggagta 89
>RF00906;MIR1122;AK248998.1/1925-1844 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 82
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 69 tcttatatttctttacagagggagta 94
||||||||||||||||||||||||||
Sbjct: 30 tcttatatttctttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 tcttatatttctttacagagggag 92
||||||||||||||||||||||||
Sbjct: 53 tcttatatttctttacagagggag 76
>RF00906;MIR1122;EU282676.1/869-732 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 138
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Minus
Query: 12 tactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacact 69
||||||||||||| || ||||||||||| ||||||| | |||| || ||||||| || ||
Sbjct: 134 tactccctccgtaaactaatataagagcatttagatcattaaaatagtgatctaaacgct 75
Query: 70 cttatatt 77
||||||||
Sbjct: 74 cttatatt 67
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||||||||||||| |||| |||||||||| | |||||||||| ||||| |
Sbjct: 67 aatataagagcgtttagatcactattttaatgatctaaatgctcttatattagtttacgg 126
Query: 87 agggagta 94
||||||||
Sbjct: 127 agggagta 134
>RF00906;MIR1122;FJ711024.1/1206-1298 37717:Agropyron mongolicum
Length = 93
Score = 52.0 bits (26), Expect = 1e-06
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 17 cctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacactcttat 74
|||||||| || ||||||||||||||||||| |||| || ||||| | || |||||||
Sbjct: 84 cctccgtaaactaatataagagcgtttagatcactattttagtgatccaaacgctcttat 25
Query: 75 atttctttacagagggagta 94
||| |||||||||||||||
Sbjct: 24 attaatttacagagggagta 5
Score = 48.1 bits (24), Expect = 2e-05
Identities = 45/51 (88%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatt 77
||||||||||||||| ||| |||||| || ||||||| || ||||||||||
Sbjct: 22 aatataagagcgtttggatcactaaaatagtgatctaaacgctcttatatt 72
>RF00906;MIR1122;AF458279.1/188-280 4568:Triticum monococcum
Length = 93
Score = 50.1 bits (25), Expect = 6e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 28 aatataagagcgtttagat-actaaagtaatgatctanacactcttatatttctttacag 86
||||||||| | ||||||| ||||||||| ||||||| | ||||||||| |||||||
Sbjct: 22 aatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagtttacag 81
Query: 87 agggagta 94
||||||||
Sbjct: 82 agggagta 89
>RF00906;MIR1122;DQ295068.1/1030-931 4550:Secale cereale (rye)
Length = 100
Score = 48.1 bits (24), Expect = 2e-05
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 11 gtactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatcta 63
|||||||||| ||| || ||||||||||| ||||||| ||||||||| |||||||
Sbjct: 4 gtactccctctgtaaactaatataagagcttttagatcactaaagtagtgatcta 58
>RF00906;MIR1122;AY853252.1/53493-53585 4513:Hordeum vulgare
Length = 93
Score = 48.1 bits (24), Expect = 2e-05
Identities = 72/86 (83%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 11 gtactccctccgtanac-aatataagagcgtttagat-actaaagtaatgatctanacac 68
||||||||||| || || ||||||||||| ||||||| | |||| || ||||||| | |
Sbjct: 90 gtactccctccataaactaatataagagcatttagattattaaaatagtgatctaaatgc 31
Query: 69 tcttatatttctttacagagggagta 94
| ||||||| |||||||||||||||
Sbjct: 30 ttttatattagtttacagagggagta 5
>RF00906;MIR1122;CR626934.1/48037-47942 4565:Triticum aestivum
(bread wheat)
Length = 96
Score = 44.1 bits (22), Expect = 3e-04
Identities = 60/71 (84%), Gaps = 4/71 (5%)
Strand = Plus / Minus
Query: 28 aatataagagcgtttagat-acta---aagtaatgatctanacactcttatatttcttta 83
||||||||||||||||||| |||| |||| ||||||| || |||| |||||| || |
Sbjct: 75 aatataagagcgtttagatcactagagtagtagtgatctaaacgctctcatatttattca 16
Query: 84 cagagggagta 94
|||||||||||
Sbjct: 15 cagagggagta 5
>RF00906;MIR1122;AK250453.1/820-743 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 78
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 65 acactcttatatttctttacagagggagta 94
||||||||||||| |||||||||||||||
Sbjct: 34 acactcttatattagtttacagagggagta 5
