miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>29124_hsa-mir-1273:mirbase
          Length = 103

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                       
Query: 38  tgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagattgtgcc 97
           |||||||||||||| |  |||||| ||| || |||| |||||||||||| |||||| |||
Sbjct: 1   tgaggcaggagaattgcttgaacccgggtggtggaggttgcagtgagccaagattgcgcc 60

                       
Query: 98  actgcactccag 109
           ||||||||||||
Sbjct: 61  actgcactccag 72




>30688_ptr-mir-1273:mirbase
          Length = 102

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                       
Query: 38  tgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagattgtgcc 97
           |||||||||| ||| |  |||||||||| || |||| |||||||||||| |||||| |||
Sbjct: 1   tgaggcaggaaaattgcttgaacctgggtggtggaggttgcagtgagccaagattgcgcc 60

                       
Query: 98  actgcactccag 109
           ||||||||||||
Sbjct: 61  actgcactccag 72




>31332_ppy-mir-1273:mirbase
          Length = 103

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                       
Query: 38  tgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagattgtgcc 97
           |||||||||||||| |  |||||| |||||| |||| |||||||||||| ||||   |||
Sbjct: 1   tgaggcaggagaattgcttgaacccgggaggtggaggttgcagtgagccaagatcacgcc 60

                       
Query: 98  actgcactccag 109
           ||||||||||||
Sbjct: 61  actgcactccag 72




>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                       
Query: 38  tgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagccgagattgtgcc 97
           |||||||||||||| |  ||||||  ||| | ||||  |||||||||||||||| | |||
Sbjct: 1   tgaggcaggagaattgcttgaacccaggaagtggaggctgcagtgagccgagatcgagcc 60

                       
Query: 98  actgcactccag 109
           |||| |||||||
Sbjct: 61  actgtactccag 72




>29613_hsa-mir-4419a:mirbase
          Length = 77

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 15 gtagtcctagctattcgggaggctgaggcaggaga 49
          |||||| |||||| |||||||||||||| ||||||
Sbjct: 16 gtagtcttagctactcgggaggctgagggaggaga 50




>28878_hsa-mir-566:mirbase
          Length = 94

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 32 ggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagc 85
          |||||||| ||||| ||||| |  |||||| |||||||| || |||||||||||
Sbjct: 41 ggaggctggggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 94




>29126_hsa-mir-1273d:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 76  tgcagtgagccgagattgtgccactgcact 105
           ||||||||||| |||| |||||||||||||
Sbjct: 29  tgcagtgagccaagatcgtgccactgcact 58




>30505_ptr-mir-566:mirbase
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 32 ggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagc 85
          |||||||| ||||| ||||| |  |||||| |||||||| || |||||||||||
Sbjct: 40 ggaggctggggcagcagaatcgcttgaacccgggaggcgaaggttgcagtgagc 93




>31147_ppy-mir-566:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                
Query: 32 ggaggctgaggcaggagaatggtgtgaacctgggaggcggagcttgcagtgagc 85
          |||||||| ||||| ||||| |  |||||| |||||||| || |||||||||||
Sbjct: 37 ggaggctggggcagcagaattgcttgaacccgggaggcgaaggttgcagtgagc 90




>31314_ppy-mir-1254:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  attgtgccactgcactccag 109
           ||||||||||||||||||||
Sbjct: 50  attgtgccactgcactccag 69