miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 182 bits (92), Expect = 4e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 60
Query: 71 cccgccgggccgggccgggtttaataactatg 102
||||||||||||||||||||||||||||||||
Sbjct: 61 cccgccgggccgggccgggtttaataactatg 92
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 10 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 60
Query: 70 acccgccgggccgggccgggtttaataact 99
|||||||||||||| |||||||||||||||
Sbjct: 61 acccgccgggccggaccgggtttaataact 90
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 168 bits (85), Expect = 6e-43
Identities = 91/93 (97%)
Strand = Plus / Plus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gccggtcttttattaaacccggaccggtccagccaccgggtcgatcgggtcccgggtcga 60
Query: 71 cccgccgggccgggccgggtttaataactatgc 103
|||||||||||||| ||||||||||||||||||
Sbjct: 61 cccgccgggccgggtcgggtttaataactatgc 93
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 60
Query: 74 gccgggccgggccgggtttaataa 97
||||||||||||||||||||||||
Sbjct: 61 gccgggccgggccgggtttaataa 84
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 73
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 60
Query: 74 gccgggccgggccgggtttaataac 98
|||||||||||||||||||||||||
Sbjct: 61 gccgggccgggccgggtttaataac 85
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 155 bits (78), Expect = 8e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 155 bits (78), Expect = 8e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 155 bits (78), Expect = 8e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 155 bits (78), Expect = 8e-39
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 145 bits (73), Expect = 8e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 73
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 60
Query: 74 gccgggccgggccgggtttaataac 98
|||||||| | ||||||||||||||
Sbjct: 61 gccgggccagaccgggtttaataac 85
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 141 bits (71), Expect = 1e-34
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 23 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccg 82
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggttgacccgccgggccg 63
Query: 83 ggccgggtttaataa 97
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 139 bits (70), Expect = 5e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 13 cggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacc 72
|||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 1 cggtcttttattaaacccggaccg-tccagcgaccgggtcgatcgggtcccgggtcgacc 59
Query: 73 cgccgggccgggccgggtttaataac 98
||||||||||||||||||||||||||
Sbjct: 60 cgccgggccgggccgggtttaataac 85
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 139 bits (70), Expect = 5e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
|||||||| |||||||||
Sbjct: 61 ccgggccgagtttaataa 78
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 135 bits (68), Expect = 8e-33
Identities = 83/88 (94%)
Strand = Plus / Plus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 70
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
Sbjct: 1 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccggatcccaggtcta 60
Query: 71 cccgccgggccgggccgggtttaataac 98
||||||||||||| || |||||||||||
Sbjct: 61 cccgccgggccggaccaggtttaataac 88
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 135 bits (68), Expect = 8e-33
Identities = 74/76 (97%)
Strand = Plus / Plus
Query: 24 taaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccgg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccgg 70
Query: 84 gccgggtttaataact 99
|||||||||| ||||
Sbjct: 71 tccgggtttaaaaact 86
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 133 bits (67), Expect = 3e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 23 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccg 82
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgagtcccgggtcgacccgccgggctg 63
Query: 83 ggccgggtttaataa 97
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 133 bits (67), Expect = 3e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 15 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccg 74
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 5 gtcttttattaaacccggaccggtccagccactgggtcgaccgggtcccgggtcgactcg 64
Query: 75 ccgggccgggccgggtttaataa 97
||||||| |||||||| ||||||
Sbjct: 65 ccgggccaggccgggtgtaataa 87
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 131 bits (66), Expect = 1e-31
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcgatcgggtcccgggtcgacccgccggg 60
Query: 80 ccgggccgggtttaataa 97
|||| |||||||||||||
Sbjct: 61 ccggaccgggtttaataa 78
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 131 bits (66), Expect = 1e-31
Identities = 86/90 (95%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 10 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 69
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 agccggtcttt-attaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcg 58
Query: 70 acccgccgggccgggccgggtttaataact 99
||||||||| | ||||||||||||||||||
Sbjct: 59 acccgccggcctgggccgggtttaataact 88
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 131 bits (66), Expect = 1e-31
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 76
||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
Query: 77 gggccgggccgggtttaataac 98
||||||||||||||||||||||
Sbjct: 61 gggccgggccgggtttaataac 82
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 127 bits (64), Expect = 2e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgaccc 73
||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 ggtcttttagtaaacccggaccggtccagccaccggatcgaccaggtcccgggtcgaccc 60
Query: 74 gccgggccgggccgggtttaataa 97
|| ||| |||||||||||||||||
Sbjct: 61 gctgggtcgggccgggtttaataa 84
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 123 bits (62), Expect = 3e-29
Identities = 77/82 (93%)
Strand = Plus / Minus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 76
||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggttgaccgggtcccgattcgacccacc 25
Query: 77 gggccgggccgggtttaataac 98
|||||||||||||||||||||
Sbjct: 24 aggccgggccgggtttaataac 3
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 119 bits (60), Expect = 5e-28
Identities = 60/60 (100%)
Strand = Plus / Minus
Query: 7 cacagccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cacagccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 33
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 105 bits (53), Expect = 7e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 105 bits (53), Expect = 7e-24
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 66
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 26
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 105 bits (53), Expect = 7e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tgttgccacagccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggt 60
||||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||
Sbjct: 55 tgttgccccagccggtcttttaataaacccagaccggtccagccaccgggtcgatcgggt 114
Query: 61 cccgggtcg 69
|||||||||
Sbjct: 115 cccgggtcg 123
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 105 bits (53), Expect = 7e-24
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 46 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggtttaataac 98
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggtttaataac 3
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 99.6 bits (50), Expect = 4e-22
Identities = 76/86 (88%), Gaps = 9/86 (10%)
Strand = Plus / Plus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 76
||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccg---------ggtcccgggtcgacccgcc 51
Query: 77 gggccgggccgggtttaataactatg 102
||||||||||||||||||||||||||
Sbjct: 52 gggccgggccgggtttaataactatg 77
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 93.7 bits (47), Expect = 3e-20
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 10 agccggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 agccggtcttttattaaacccggaccggtccagccaccgggtcgacc 33
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
||||||||||| || ||||||||||||||||||||||
Sbjct: 43 ccgggtcgacctgctgggccgggccgggtttaataac 7
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 91.7 bits (46), Expect = 1e-19
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccggtcttttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
|||||||||||||||||||||||||| ||||||||||
Sbjct: 36 ccgggtcgacccgccgggccgggccgagtttaataac 72
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 91.7 bits (46), Expect = 1e-19
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
|||||||||||||||||||||||| |||||||||||| ||| || ||| ||||||||| |
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgaccaggttccaggttgacccgccgag 19
Query: 80 ccgggccgggtttaataa 97
||| |||| |||||||||
Sbjct: 18 ccgagccgagtttaataa 1
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 25 aaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccggg 84
||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||||
Sbjct: 73 aaacccgaaccggtccaggtcccgggtcggccgggtcccgagtcgacccgccgggccggt 14
Query: 85 ccgggtttaataa 97
|||||||||||||
Sbjct: 13 ccgggtttaataa 1
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 87.7 bits (44), Expect = 2e-18
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 10 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 69
||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 97 agccggtcttttaacaaacccgaaccggtccagccactaggataaccgggtcccgggtcg 38
Query: 70 acccgccgggccgggccgggtttaataa 97
||| ||||||||| |||||||||||||
Sbjct: 37 acctgccgggccgatccgggtttaataa 10
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 87.7 bits (44), Expect = 2e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 13 cggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggtcttttattaaacccggaccggtccagccaccgggtcgacc 44
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
||||||||||||||||| |||||||| ||||||||||
Sbjct: 34 ccgggtcgacccgccggaccgggccgagtttaataac 70
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 87.7 bits (44), Expect = 2e-18
Identities = 76/88 (86%), Gaps = 9/88 (10%)
Strand = Plus / Minus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 70
|||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 84 gccggtcttttattaaacccggaccggtccagcc---------accaggtcccgggtcga 34
Query: 71 cccgccgggccgggccgggtttaataac 98
||| || |||||||||||||||||||||
Sbjct: 33 cccaccaggccgggccgggtttaataac 6
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
||||||||||||||| |||||||||||||||||||||
Sbjct: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 85.7 bits (43), Expect = 7e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 14 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataactatg 102
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 ccgggtcgacccgccgggccgggccgggtttaataactatg 73
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 83.8 bits (42), Expect = 3e-17
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 18 ttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccg 77
||||| ||||||||||||||||| || || ||||||||||||||||| |||||||| |||
Sbjct: 81 ttttagtaaacccggaccggtccggctactgggtcgaccgggtcccgagtcgacccaccg 22
Query: 78 ggccgg 83
||||||
Sbjct: 21 ggccgg 16
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 79.8 bits (40), Expect = 4e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1 tgttgccacagccggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||| |||||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 48 tgttgccccagccgatcttttattaaacccagaccggtccagccaccgggttgacc 103
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 77.8 bits (39), Expect = 2e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 46 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggttt 92
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 90 ccgggtcgaccgggtcccgggtcgacccgccgggccggttcgggttt 136
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgac 55
|||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgac 30
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataa 97
|||||||||| ||||||||||||||||||||||||
Sbjct: 39 ccgggtcgacttgccgggccgggccgggtttaataa 4
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 75.8 bits (38), Expect = 6e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 15 gtcttttattaaacccggaccggtccagccaccgggtc 52
||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gccgggccgggccgggtttaataac 98
|||||||||||||||||||||||||
Sbjct: 44 gccgggccgggccgggtttaataac 68
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 69/82 (84%), Gaps = 12/82 (14%)
Strand = Plus / Minus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 76
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccggt------------cgggtcgacccgcc 25
Query: 77 gggccgggccgggtttaataac 98
||||||||||||||||||||||
Sbjct: 24 gggccgggccgggtttaataac 3
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgacc 56
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgacc 56
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataa 97
||||||||||||||||||||||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 23 ttaaacccggaccggtccagccaccgggtcgacc 56
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||||||||||||||||||||| ||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacc 29
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
||||||||||| |||||||||||||||||||||||||
Sbjct: 39 ccgggtcgacctgccgggccgggccgggtttaataac 3
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 18 ttttattaaacccggaccggtccagccaccgggtc 52
|||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgggtc 39
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 69.9 bits (35), Expect = 4e-13
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 15 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccg 74
|||||||| |||| |||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 1 gtcttttaacaaactcggaccggtccagccatcgggtcgaccgggttccaagtcgacccg 60
Query: 75 ccgggccgggccgggtttaataa 97
| ||||| |||||||| ||||
Sbjct: 61 ctaggccgatccgggtttgataa 83
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 cgggtcgacccgccgggccgggccgggtttaataa 97
|||||||||||||||||||||||||||||||||||
Sbjct: 32 cgggtcgacccgccgggccgggccgggtttaataa 66
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 67.9 bits (34), Expect = 2e-12
Identities = 69/82 (84%), Gaps = 9/82 (10%)
Strand = Plus / Plus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 76
||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtctt---------gggtcgacccgcc 51
Query: 77 gggccgggccgggtttaataac 98
||||||| ||||||||||||||
Sbjct: 52 gggccggaccgggtttaataac 73
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 54 accgggtcccgggtcgacccgccgggccgggccgggtttaataact 99
|||||||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 32 accgggtcccgggtcgacccgccgggccggtccaggtttaaaaact 77
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 67.9 bits (34), Expect = 2e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 66
||||||||||||||||||||||| ||| ||||| |||||||||| |||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccggg 50
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 ccgggccgggccgggtttaataac 98
||||||||||||||||||||||||
Sbjct: 46 ccgggccgggccgggtttaataac 69
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
|||||||||||| |||| ||||||||| | |||||||||| | || || |||||| |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 80 ccgggccgggtttaataa 97
|||| |||||||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 20 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 79
|||||||||||| |||| ||||||||| | |||||||||| | || || |||||| |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 80 ccgggccgggtttaataa 97
|||| |||||||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 65.9 bits (33), Expect = 6e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 12 ccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgac 71
|||||||||| ||||||| |||||||||||| |||||||| ||||||| |||||| ||
Sbjct: 59 ccggtcttttgacaaacccgaaccggtccagcccccgggtcggccgggtctcgggtcaac 118
Query: 72 ccgccgggc 80
||||||||
Sbjct: 119 tcgccgggc 127
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataac 98
|||| ||||||||||||||||||||||||||||||||
Sbjct: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 17 cttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtc 52
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggccgggccgggtttaataa 97
||||||| ||| ||||||||||||||||||||||||
Sbjct: 27 ccgggtcaacctgccgggccgggccgggtttaataa 62
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 61.9 bits (31), Expect = 9e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 26 aacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacc 72
|||| ||| ||||||||||||||||| |||||||||||| |||||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgaccgggtcccgagtcgacc 124
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 20 ttattaaacccggaccggtccagccaccgggtc 52
|||||||||||||||||||||||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc 33
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 gggccgggccgggtttaataa 97
|||||||||||||||||||||
Sbjct: 36 gggccgggccgggtttaataa 56
>52133_ptc-miRf10311-akr:pmrd
Length = 122
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 ccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgac 71
|||||||||| |||||| |||| || |||||| |||||| |||||||||||||||||
Sbjct: 75 ccggtcttttgacaaacccaaaccgatctagccactgggtcggccgggtcccgggtcgac 16
Query: 72 ccgccgggc 80
| |||||||
Sbjct: 15 cagccgggc 7
>52132_ptc-miRf10310-akr:pmrd
Length = 122
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 ccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgac 71
|||||||||| |||||| |||| || |||||| |||||| |||||||||||||||||
Sbjct: 75 ccggtcttttgacaaacccaaaccgatctagccactgggtcggccgggtcccgggtcgac 16
Query: 72 ccgccgggc 80
| |||||||
Sbjct: 15 cagccgggc 7
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 25 aaacccggaccggtccagccaccgggtcgacc 56
|||||||||| |||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacc 11
>52876_ptc-miRf11054-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 46 ccgggtcgaccgggtcccgggtcgacccgccgggccgg 83
|||||||| ||||||| ||||||||||||||| |||||
Sbjct: 48 ccgggtcggccgggtctcgggtcgacccgccgagccgg 85
>52447_ptc-miRf10625-akr:pmrd
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcga 70
||||||||||| | ||||||| |||||||| |||||||| || |||||| ||||||
Sbjct: 79 gccggtcttttgtcttacccggatcggtccaggtcccgggtcggccaggtcccaggtcga 20
Query: 71 cccgccgggccgg 83
||| |||||||||
Sbjct: 19 cccaccgggccgg 7
>52252_ptc-miRf10430-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 38 tccagccaccgggtcgaccgggtcccgggtcgaccc 73
|||||| ||||||| ||||| |||||||||||||||
Sbjct: 78 tccagctaccgggttgaccgagtcccgggtcgaccc 113
>53864_ptc-miRf12042-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 55 ccgggtcccgggtcgacccgccgggccgggccgggttt 92
||||||| ||| ||||||| | ||||||||||||||||
Sbjct: 43 ccgggtctcggatcgaccctctgggccgggccgggttt 6
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 62 ccgggtcgacccgccgggccgg 83
||||||||||||||||||||||
Sbjct: 25 ccgggtcgacccgccgggccgg 4
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 33 accggtccagccaccgggtcgacc 56
||||||||| ||||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgacc 15
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 27 acccggaccggtccagccaccg 48
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 29 ccggaccggtccagccaccgggtcga 54
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 gccggtcttttattaaacccggaccggtccagccaccg 48
|||| ||||||| ||||| || ||||||||||||||||
Sbjct: 68 gccgatcttttaataaactcgaaccggtccagccaccg 31
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 ggaccggtccagccaccgggt 51
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>52394_ptc-miRf10572-akr:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 12 ccggtcttttattaaacccggaccggtccagccaccgggtcgacc 56
||||||||||| ||||| ||||||||| ||||||| |||||||
Sbjct: 60 ccggtcttttaacaaaccaggaccggtctagccacctagtcgacc 16
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 65 ggtcgacccgccgggccgggc 85
|||||||||||||||||||||
Sbjct: 25 ggtcgacccgccgggccgggc 5
>53762_ptc-miRf11940-akr:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 ccgggtcgacccgccgggcc 81
||||||||||||||||||||
Sbjct: 94 ccgggtcgacccgccgggcc 113
