miRNEST 2.0, an integrative microRNA resource :: BLAST
>45814_miR408:micropc
Length = 85
Score = 168 bits (85), Expect = 9e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 49 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 60
Query: 109 cccatgcactgcctcttccctggct 133
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>46401_miR408:micropc
Length = 83
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 50 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 60
Query: 110 ccatgcactgcctcttccctggc 132
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 165 bits (83), Expect = 1e-41
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 50 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 60
Query: 110 ccatgcactgcctcttccctggc 132
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>45593_miR408:micropc
Length = 85
Score = 161 bits (81), Expect = 2e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 49 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 108
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctcta 60
Query: 109 cccatgcactgcctcttccctggct 133
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 157 bits (79), Expect = 3e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 50 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 109
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctac 60
Query: 110 ccatgcactgcctcttccctggc 132
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 157 bits (79), Expect = 3e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 50 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 109
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctac 60
Query: 110 ccatgcactgcctcttccctggc 132
|||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83
>46359_miR408:micropc
Length = 85
Score = 73.8 bits (37), Expect = 4e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 54 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 112
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 5 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 64
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>46309_miR408:micropc
Length = 83
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 54 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 112
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 113 tgcactgcctcttccctggc 132
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 54 gggaacaggcagagcatggatggagctactaacag-aagtacatgttttggctctaccca 112
|||||||||||||||||||||| ||||| |||||| || | |||||||||| || ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 113 tgcactgcctcttccctggc 132
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45531_miR408:micropc
Length = 89
Score = 63.9 bits (32), Expect = 4e-11
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 49 agacggggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggc 104
|||| ||||||||| ||||||||||||||| | | ||||||| | | |||| ||||
Sbjct: 1 agacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggc 60
Query: 105 tctacccatgcactgcctcttccctggct 133
||||| |||||||||||||||||||||||
Sbjct: 61 tctactcatgcactgcctcttccctggct 89
>46728_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 6e-10
Identities = 70/83 (84%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 54 gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 109
||||||||| ||||||||||||||| | | ||||||| | | |||| |||||||||
Sbjct: 5 gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 64
Query: 110 ccatgcactgcctcttccctggc 132
||||||||||||||||||||||
Sbjct: 65 tcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 6e-10
Identities = 70/83 (84%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 54 gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 109
||||||||| ||||||||||||||| | | ||||||| | | |||| |||||||||
Sbjct: 5 gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 64
Query: 110 ccatgcactgcctcttccctggc 132
||||||||||||||||||||||
Sbjct: 65 tcatgcactgcctcttccctggc 87
>45949_miR408:micropc
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggc 132
|||| ||||||||| ||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 aggcagagcatggatggagcta 81
||||||||||||||||||||||
Sbjct: 10 aggcagagcatggatggagcta 31
>45551_miR408:micropc
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggc 132
|||| ||||||||| ||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 60 aggcagagcatggatggagcta 81
||||||||||||||||||||||
Sbjct: 10 aggcagagcatggatggagcta 31
>45398_miR408:micropc
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggct 133
|||| |||||| || |||||||||||||||||||||||
Sbjct: 52 tgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggc 132
|||| |||||| || ||||||||||||||||||||||
Sbjct: 51 tgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggc 132
|||| |||||| || ||||||||||||||||||||||
Sbjct: 51 tgttgtggctccactcatgcactgcctcttccctggc 87
>45394_miR408:micropc
Length = 112
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 catgcactgcctcttccctggct 133
|||||||||||||||||||||||
Sbjct: 90 catgcactgcctcttccctggct 112
>44861_miR408:micropc
Length = 121
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 111 catgcactgcctcttccctggct 133
|||||||||||||||||||||||
Sbjct: 99 catgcactgcctcttccctggct 121
>44968_miR408:micropc
Length = 110
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 catgcactgcctcttccctggc 132
||||||||||||||||||||||
Sbjct: 89 catgcactgcctcttccctggc 110
>44821_miR408:micropc
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 111 catgcactgcctcttccctggc 132
||||||||||||||||||||||
Sbjct: 98 catgcactgcctcttccctggc 119
