miRNEST 2.0, an integrative microRNA resource :: BLAST
>51762_ptc-miR408:pmrd
Length = 105
Score = 200 bits (101), Expect = 3e-52
Identities = 104/105 (99%)
Strand = Plus / Plus
Query: 37 agagacagatgaagacggggaacaggcagagcatggatggagctactaacagaagtacat 96
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 agagacagatgaagacggggaacaggcagagcatggatggagctactaacagaagtactt 60
Query: 97 gttttggctctacccatgcactgcctcttccctggcttgtggctc 141
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttggctctacccatgcactgcctcttccctggcttgtggctc 105
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 149 bits (75), Expect = 8e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 52 cggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctaccc 111
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctaccc 60
Query: 112 atgcactgcctcttccctg 130
|||||||||||||||||||
Sbjct: 61 atgcactgcctcttccctg 79
>54389_rco-miR408:pmrd
Length = 129
Score = 113 bits (57), Expect = 5e-26
Identities = 106/120 (88%), Gaps = 3/120 (2%)
Strand = Plus / Plus
Query: 32 cagaaagagacagatgaagacggggaacaggcagagcatggatggagctactaacagaag 91
|||||| ||||||| ||||| |||||||||||| |||||||||| |||||||||||||
Sbjct: 9 cagaaacagacagacaaagactgggaacaggcagtgcatggatggggctactaacagaa- 67
Query: 92 taca--tgttttggctctacccatgcactgcctcttccctggcttgtggctcttcttttt 149
||| |||||||||||||||| |||||||||||||||||||||| || ||||||||||
Sbjct: 68 aacatctgttttggctctacccctgcactgcctcttccctggcttccggttcttcttttt 127
>48428_cpt-miR408:pmrd
Length = 100
Score = 79.8 bits (40), Expect = 7e-16
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 48 aagacggggaacaggcagagcatggatggagctactaacagaagtac-atgttttggctc 106
|||||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 7 aagacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctc 64
Query: 107 tacccatgcactgcctcttccctggct 133
|||||||||||||||||||||||||
Sbjct: 65 ctcccatgcactgcctcttccctggct 91
>54892_vvi-miR408:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggct 133
|||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgtttttgctctacccatgcactgcctcttccctggct 98
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 96 tgttttggctctacccatgcactgcctcttccctggct 133
||||||| ||||||||||||||||||||||||||||||
Sbjct: 42 tgttttgtctctacccatgcactgcctcttccctggct 5
>47031_ath-miR408:pmrd
Length = 218
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 96 tgttttggctctacccatgcactgcctcttccctggct 133
||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
>51347_ppe-miR408:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 1e-11
Identities = 76/90 (84%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 48 aagacggggaacaggcagagcatggatggagctactaacagaagtaca----tgttttgg 103
||||| ||||||||| ||||||||||||||| | | ||||||| | | |||| |||
Sbjct: 7 aagacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtgg 66
Query: 104 ctctacccatgcactgcctcttccctggct 133
|||||| |||||||||||||||||||||||
Sbjct: 67 ctctactcatgcactgcctcttccctggct 96
>51397_ppt-miR408b:pmrd
Length = 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 111 catgcactgcctcttccctggctt 134
||||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggctt 115
>46892_aqc-miR408:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 110 ccatgcactgcctcttccctggct 133
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 108 acccatgcactgcctcttccctggct 133
|||| |||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 atgcactgcctcttccctggct 133
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 112 atgcactgcctcttccctggct 133
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>48317_bdi-miR408:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 110 ccatgcactgcctcttccctgg 131
||||||||||||||||||||||
Sbjct: 67 ccatgcactgcctcttccctgg 88
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>54690_tae-miR408:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 113 tgcactgcctcttccctggct 133
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
