miRNEST 2.0, an integrative microRNA resource :: BLAST
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 206 bits (104), Expect = 3e-54
Identities = 116/120 (96%)
Strand = Plus / Plus
Query: 13 tggagaaacatcattgagtgcagcgttgatgaaatcctacattttgtgttattaaattgt 72
||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| |||
Sbjct: 1 tggagaaccatcattgagtgcagcgttgatgaaatcctccattttgtgctattaaactgt 60
Query: 73 taccaaccctttatggggcatggcatcatttcaccagcgctgcattcaatcatgtttttc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taccaaccctttatggggcatggcatcatttcaccagcgctgcattcaatcatgtttttc 120
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 97 atcatttcaccagcgctgcattcaatcatgtttttc 132
||||||||||||||||||||||||| ||||||||||
Sbjct: 79 atcatttcaccagcgctgcattcaaccatgtttttc 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 cattgagtgcagcgttgatgaaat 47
||||||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatgaaat 35
>40380_rco-MIR397:mirbase
Length = 157
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 100 atttcaccagcgctgcattcaatcatgttttt 131
||||||||||||||||||||||||||||||||
Sbjct: 126 atttcaccagcgctgcattcaatcatgttttt 157
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 18 aaacatcattgagtgcagcgttgatgaa 45
||||||||||||||||||||||||||||
Sbjct: 1 aaacatcattgagtgcagcgttgatgaa 28
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 18 aaacatcattgagtgcagcgttgatgaaa 46
|||||||||||||||||||||||||||||
Sbjct: 6 aaacatcattgagtgcagcgttgatgaaa 34
>41244_csi-MIR397:mirbase
Length = 156
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 18 aaacatcattgagtgcagcgttgatgaa 45
||||||||||||||||||||||||||||
Sbjct: 13 aaacatcattgagtgcagcgttgatgaa 40
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 101 tttcaccagcgctgcattcaatcatgttttt 131
|||||||||||||||| || |||||||||||
Sbjct: 87 tttcaccagcgctgcactcgatcatgttttt 117
>41143_tcc-MIR397:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttgatgaa 45
||||||||||||||||||||||||||
Sbjct: 18 acatcattgagtgcagcgttgatgaa 43
>39880_aly-MIR397b:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 aaacatcattgagtgcagcgttgatg 43
||||||||||||||||||||||||||
Sbjct: 14 aaacatcattgagtgcagcgttgatg 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 107 cagcgctgcattcaatcatgtttttctaa 135
||||| |||||||||| ||||||||||||
Sbjct: 95 cagcgttgcattcaattatgtttttctaa 123
>42037_osa-MIR397a:mirbase
Length = 114
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttgatgaa 45
|||||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatgaa 33
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttgatgaa 45
|||||||||||||||||||||||||
Sbjct: 30 catcattgagtgcagcgttgatgaa 54
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttgatgaa 45
|||||||||||||||||||||||||
Sbjct: 176 catcattgagtgcagcgttgatgaa 200
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 catcattgagtgcagcgttgatgaa 45
|||||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatgaa 40
>41547_sly-MIR397:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agaaacatcattgagtgcagcgttgatga 44
|||||||| ||||||||||||||||||||
Sbjct: 11 agaaacatgattgagtgcagcgttgatga 39
>40298_bna-MIR397b:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 aacatcattgagtgcagcgttgatg 43
|||||||||||||||||||||||||
Sbjct: 2 aacatcattgagtgcagcgttgatg 26
>40297_bna-MIR397a:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 aacatcattgagtgcagcgttgatg 43
|||||||||||||||||||||||||
Sbjct: 2 aacatcattgagtgcagcgttgatg 26
>40087_ath-MIR397a:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 aacatcattgagtgcagcgttgatg 43
|||||||||||||||||||||||||
Sbjct: 7 aacatcattgagtgcagcgttgatg 31
>39879_aly-MIR397a:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 aacatcattgagtgcagcgttgatg 43
|||||||||||||||||||||||||
Sbjct: 16 aacatcattgagtgcagcgttgatg 40
>42587_sbi-MIR397:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tcattgagtgcagcgttgatga 44
||||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatga 22
>39382_pab-MIR397:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 acatcattgagtgcagcgttga 41
||||||||||||||||||||||
Sbjct: 14 acatcattgagtgcagcgttga 35
>42038_osa-MIR397b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 25 attgagtgcagcgttgatgaa 45
|||||||||||||||||||||
Sbjct: 13 attgagtgcagcgttgatgaa 33
>40088_ath-MIR397b:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 aacatcattgagtgcagcgttgatg 43
|||||||||||||||| ||||||||
Sbjct: 7 aacatcattgagtgcatcgttgatg 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 107 cagcgctgcattcaatcatgtttttcta 134
||||| |||||||||| |||||||||||
Sbjct: 82 cagcgttgcattcaattatgtttttcta 109
>41891_hvu-MIR397:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 ttgagtgcagcgttgatgaa 45
||||||||||||||||||||
Sbjct: 14 ttgagtgcagcgttgatgaa 33
