miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AK249748.1/2677-2573 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 119 bits (60), Expect = 1e-26
Identities = 90/100 (90%)
Strand = Plus / Minus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||
Sbjct: 101 tactccctccgtcgcaaaataaatgtcttaaacttagtataaatttatagtaaagctagt 42
Query: 85 acaaagttgagacagtaattttgagacagagggagtacta 124
|||||||| ||||||| |||||| |||||||||||||||
Sbjct: 41 acaaagttaagacagttattttggaacagagggagtacta 2
>RF00906;MIR1122;AJ234485.1/114-218 4513:Hordeum vulgare
Length = 105
Score = 105 bits (53), Expect = 2e-22
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| ||||||| ||||||| ||||||| || ||||||||| |||||||
Sbjct: 5 tactccctccgtctcaaaataagtgtcttaatcttagtacaattttgtactagagctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
|||| ||||||||||| ||||||||||||||||||||
Sbjct: 65 acaatgttgagacagttattttgagacagagggagta 101
>RF00906;MIR1122;AJ249141.1/1014-910 4513:Hordeum vulgare
Length = 105
Score = 103 bits (52), Expect = 6e-22
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 22 atatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagct 81
||||| |||||| || ||||||||| ||||||| ||||||| || ||||||||| ||||
Sbjct: 2 atatattccctcggtcctaaaataagtgtcttaagcttagtacaactttgtactagagct 61
Query: 82 agtacaaagttgagacagtaattttgagacagagggagta 121
| ||||||||||||||||| |||||||||| |||||||||
Sbjct: 62 aatacaaagttgagacagttattttgagacggagggagta 101
>RF00906;MIR1122;AY133251.1/901-1005 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 103 bits (52), Expect = 6e-22
Identities = 88/100 (88%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
|||||||||||||||| ||||||| |||||| | ||||| || ||||||||| |||||
Sbjct: 3 tatactccctccgttccaaaataagtgtcttgagcgtagtacaattttgtactagagcta 62
Query: 83 gtacaaagttgagacagtaattttgagacagagggagtac 122
|||||||||||||||||| |||||| ||| ||||||||||
Sbjct: 63 gtacaaagttgagacagttattttgggacggagggagtac 102
>RF00906;MIR1122;EU593539.1/914-1018 4513:Hordeum vulgare
Length = 105
Score = 97.6 bits (49), Expect = 4e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| ||||||| |||||||||||||| ||||| | |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatactagatctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
| |||||||||||||| |||||| ||| |||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;AY943294.1/62260-62364 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 91.7 bits (46), Expect = 2e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||||| ||||||| ||||||| |||| || || ||||||||||| ||| |
Sbjct: 5 tactccctccgttccaaaataagtgtcttaagcttaatacaattttgtactaaatctaat 64
Query: 85 acaaagttgagacagtaattttgagacagagggagtac 122
|||||||||||||||| |||||| ||| |||| |||||
Sbjct: 65 acaaagttgagacagttattttgggacggaggaagtac 102
>RF00906;MIR1122;DQ445238.1/5626-5730 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 9e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| ||||||| |||||||||||||| || || | |||||
Sbjct: 5 tactccctccgtcccaaaataactgtcttaagcttagtataaatttatattagatctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
| |||||||||||||| |||||| ||| |||||||||
Sbjct: 65 ataaagttgagacagttattttgggacggagggagta 101
>RF00906;MIR1122;EU282755.1/953-849 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 89.7 bits (45), Expect = 9e-18
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| ||||| | |||||| ||| ||||||||| |||||||
Sbjct: 5 tactccctccgtcccaaaataagtgtctcaagcttagtgtaattttgtactacagctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
|||||||||||||| | |||||| ||| |||||||||
Sbjct: 65 acaaagttgagacacttattttgggacggagggagta 101
>RF00906;MIR1122;DQ871219.1/106890-106994 85692:Triticum turgidum
subsp. dicoccoides
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctag 83
||||||||||||| | ||||||| |||||| ||||||| |||||||||||| || |||
Sbjct: 4 atactccctccgtcccaaaataagtgtcttgagcttagtaaaaatttgtactagagatag 63
Query: 84 tacaaagttgagacagtaattttgagacagagggagtac 122
||||||||||||||| | |||||| || ||||||||||
Sbjct: 64 tacaaagttgagacacttattttgggatggagggagtac 102
>RF00906;MIR1122;EU282239.1/1196-1300 52152:Elymus repens
Length = 105
Score = 85.7 bits (43), Expect = 1e-16
Identities = 85/99 (85%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
|||||||||||||| | ||||||| ||||| | ||||||| || |||||||||||| ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaactttgtactaaagtta 62
Query: 83 gtacaaagttgagacagtaattttgagacagagggagta 121
||||||||||||||| | |||||| ||| |||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;AF521177.1/206122-206018 4513:Hordeum vulgare
Length = 105
Score = 83.8 bits (42), Expect = 6e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctag 83
||||||||||| || ||||||| ||| | || ||||||| || ||||||||| ||||||
Sbjct: 4 atactccctccatttcaaaataattgtttcatgcttagtacaactttgtactagagctag 63
Query: 84 tacaaagttgagacagtaattttgagacagagggagta 121
||||||||||||||| | ||||||| || |||||||||
Sbjct: 64 tacaaagttgagacatttattttgaaacggagggagta 101
>RF00906;MIR1122;DQ995510.1/1615-1718 4513:Hordeum vulgare
Length = 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctag 83
||||||||||||| ||||||| ||||| | |||| ||| || ||||||||| ||||||
Sbjct: 4 atactccctccgtctcaaaataactgtctca-actttgtacaactttgtactagagctag 62
Query: 84 tacaaagttgagacagtaattttgagacagagggagtacta 124
||||||||||||||||| |||||| || ||||||||||||
Sbjct: 63 tacaaagttgagacagttattttgggatggagggagtacta 103
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 83 gtacaaagttgagacagtaattttgagacagagggagta 121
|||||||||||||||||| |||||||||| |||||||||
Sbjct: 43 gtacaaagttgagacagttattttgagacggagggagta 5
>RF00906;MIR1122;EU282250.1/1190-1294 52152:Elymus repens
Length = 105
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
|||||||||||||| | ||||||| ||||| | ||||||| || ||||||||||| ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaagcttagtacaaccttgtactaaagtta 62
Query: 83 gtacaaagttgagacagtaattttgagacagagggagta 121
||||||||||||||| | |||||| ||| |||||||||
Sbjct: 63 atacaaagttgagacatttattttgggacggagggagta 101
>RF00906;MIR1122;DQ445236.1/13423-13319 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 105
Score = 75.8 bits (38), Expect = 1e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 24 atactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctag 83
||||||||||||||| ||||||| | ||| | ||||||| || ||||||||| ||||||
Sbjct: 102 atactccctccgttccaaaataactatctcaagcttagtacaactttgtactagagctag 43
Query: 84 tacaaagttgagacagtaattttgagacagagggagta 121
|||||| |||||||| | |||||| || |||||||||
Sbjct: 42 tacaaatttgagacacttattttggaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtct 52
|||||||||||||||| ||||||| |||||
Sbjct: 3 tatactccctccgttccaaaataagtgtct 32
>RF00906;MIR1122;AF488415.1/78603-78755 4568:Triticum monococcum
Length = 153
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 57 cttagtataaatttgtactaaagctagtacaaagttgagacagtaattttgagacagagg 116
||||||| || |||||||||||| ||||||||| |||||||||| |||||| ||| ||||
Sbjct: 85 cttagtacaactttgtactaaagttagtacaaacttgagacagttattttgggacggagg 144
Query: 117 gagta 121
|||||
Sbjct: 145 gagta 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 27 ctccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagtac 86
|||||| ||| | ||||||| ||||| | ||||||| || |||| |||||| ||||||
Sbjct: 7 ctcccttcgtcccaaaataagtgtctcaaccttagtacaactttgcactaaatttagtac 66
Query: 87 aaagttgagac 97
|||||||||||
Sbjct: 67 aaagttgagac 77
>RF00906;MIR1122;AK249560.1/988-1092 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 73.8 bits (37), Expect = 6e-13
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| ||||| | ||||| || || ||||||||| |||||||
Sbjct: 101 tactccctccgtcccaaaataactgtctcaaacttaatacaagtttgtactatagctagt 42
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
| |||||||||||| | |||||| ||| || ||||||
Sbjct: 41 ataaagttgagacacttattttgggacggatggagta 5
>RF00906;MIR1122;AY663392.1/117099-117203 4565:Triticum aestivum
(bread wheat)
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 22 atatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagct 81
||||||||| ||||||||||||||| ||||| | |||||||||| ||| ||||||||||
Sbjct: 2 atatactccttccgttctaaaataagtgtctcaatcttagtataactttatactaaagct 61
Query: 82 agtacaaa 89
| ||||||
Sbjct: 62 aatacaaa 69
>RF00906;MIR1122;FJ236275.1/674-570 4573:Aegilops speltoides
Length = 105
Score = 67.9 bits (34), Expect = 3e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| ||||||| ||||| | | ||||| || |||||||||||| ||||
Sbjct: 5 tactccctccgtctcaaaataagtgtctcaagcctagtacaactttgtactaaagttagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagtac 122
|||||||| ||||| | |||||| ||| ||||||||||
Sbjct: 65 acaaagttaagacacttattttgggacggagggagtac 102
>RF00906;MIR1122;DQ901436.1/1229-1333 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 59 tagtataaatttgtactaaagctagtacaaagttgagacagtaattttgagacagaggga 118
||||| || |||||| |||||||||||||||||||||||| | |||||| ||| ||||||
Sbjct: 67 tagtacaactttgtattaaagctagtacaaagttgagacacttattttgggacggaggga 8
Query: 119 g 119
|
Sbjct: 7 g 7
>RF00906;MIR1122;X83518.1/7301-7197 4513:Hordeum vulgare
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 21 gatatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagc 80
|||||||||||||| | ||||||| ||||| | ||||||| || |||||| || |||
Sbjct: 1 gatatactccctccatctcaaaataactgtctcaagcttagtacaactttgtagtagagc 60
Query: 81 tagtacaaagttgagacagtaattttgagacagagggagta 121
|||||||||||||||||| | |||||| | ||||||||||
Sbjct: 61 tagtacaaagttgagacacttattttggaagagagggagta 101
>RF00906;MIR1122;EU282771.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 65.9 bits (33), Expect = 1e-10
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| | ||| | |||||||| || ||| ||||| |||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
|||||||||| | | |||||||||| |||||||||
Sbjct: 65 gtaaagttgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AY821694.1/1308-1197 37674:Crithopsis delileana
Length = 112
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 57 cttagtataaatttgtactaaagctagtacaaagttgagacagtaattttgagacagagg 116
||||||| || |||||||||||| |||||||||||||||||| | |||||| || ||||
Sbjct: 44 cttagtacaactttgtactaaagttagtacaaagttgagacacttattttgggatggagg 103
Query: 117 gagta 121
|||||
Sbjct: 104 gagta 108
>RF00906;MIR1122;FJ184990.1/3303-3406 4565:Triticum aestivum (bread
wheat)
Length = 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
|||||||||||||| | ||||||| ||||| | ||||||| || ||| ||||| || ||
Sbjct: 3 tatactccctccgtcccaaaataagtgtctcaaccttagtacaattttatactagagtta 62
Query: 83 gtacaaagttgagacagtaattttgagacagagggagta 121
|||||||| ||||||| | |||||| ||| |||||||||
Sbjct: 63 gtacaaag-tgagacacttattttgggacggagggagta 100
>RF00906;MIR1122;AK252392.1/1279-1175 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 61.9 bits (31), Expect = 2e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
||||| |||||||| | ||||||| ||||||| ||||||| || ||| ||| |||||
Sbjct: 3 tataccccctccgtcccaaaataagtgtcttaagcttagtacaattttatacatgagcta 62
Query: 83 gtacaaagttgagacagtaattttgagacagagggagta 121
|||||||||| |||||| |||||| ||| |||||||||
Sbjct: 63 gtacaaagttaagacagatattttgggacggagggagta 101
>RF00906;MIR1122;AJ400714.1/3663-3767 4565:Triticum aestivum (bread
wheat)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 23 tatactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagcta 82
|||||||||||||| | ||||||| ||||| | ||||||| || ||||||||| || ||
Sbjct: 103 tatactccctccgtcccaaaataagtgtctcaaccttagtacaactttgtactagagtta 44
Query: 83 gtacaaagttgagacagtaattttgagacagagggagtact 123
|| ||| |||||||| | |||||| ||| || ||||||||
Sbjct: 43 gtgtaaaattgagacacttattttgggacggaaggagtact 3
>RF00906;MIR1122;EU282768.1/632-528 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 105
Score = 58.0 bits (29), Expect = 3e-08
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| | ||||||| | ||| | |||||||| || ||| ||||| |||||||
Sbjct: 5 tactccctccgtcccaaaataactttctcaaacttagtacaactttatactagagctagt 64
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
|||| ||||| | | |||||||||| |||||||||
Sbjct: 65 gtaaagctgagatacttattttgagacggagggagta 101
>RF00906;MIR1122;AF474373.1/50497-50394 112509:Hordeum vulgare
subsp. vulgare (domesticated barley)
Length = 104
Score = 56.0 bits (28), Expect = 1e-07
Identities = 70/84 (83%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctag 83
|||||| |||||| | ||||||| ||||| | | ||||| || ||||||||| | ||||
Sbjct: 4 atactcactccgtcccaaaataactgtctcaagcctagtacaactttgtactagaactag 63
Query: 84 tacaaagttgagacagtaattttg 107
||||||||||||||| | ||||||
Sbjct: 64 tacaaagttgagacacttattttg 87
>RF00906;MIR1122;AJ234583.1/157-260 4513:Hordeum vulgare
Length = 104
Score = 50.1 bits (25), Expect = 8e-06
Identities = 80/97 (82%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagtataaatttgtactaaagctagt 84
|||||||||||| ||||||| ||||| | |||||||||| |||| ||| ||||||||
Sbjct: 100 tactccctccgtctcaaaataattgtctcaagcttagtataactttgcact-aagctagt 42
Query: 85 acaaagttgagacagtaattttgagacagagggagta 121
| ||| || ||| | | |||||||||| |||||||||
Sbjct: 41 ataaaattaagaaacttattttgagacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 91 ttgagacagtaattttgagacagagggagtactaa 125
|||||||| | |||||||||| |||||||||||||
Sbjct: 70 ttgagacaattattttgagacggagggagtactaa 104
>RF00906;MIR1122;FJ477093.1/40908-41001 4513:Hordeum vulgare
Length = 94
Score = 50.1 bits (25), Expect = 8e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 81 tagtacaaagttgagacagtaattttgagacagagggagta 121
||||||||||||||| || | |||||| |||||||||||||
Sbjct: 45 tagtacaaagttgagtcacttattttgggacagagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 68 tttgtactaaagctagtacaaagttgagacagtaattttgagacagagggagtact 123
|||||||||||| ||||| ||||||||| || | | |||| ||| |||||||||||
Sbjct: 37 tttgtactaaagttagtataaagttgagtcacttaatttgggacggagggagtact 92
>RF00906;MIR1122;DQ871219.1/88217-88124 85692:Triticum turgidum
subsp. dicoccoides
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 tttgtactaaagctagtacaaagttgag 95
|||||||||||| |||||||||||||||
Sbjct: 37 tttgtactaaagatagtacaaagttgag 64
>RF00906;MIR1122;AF488415.1/128685-128592 4568:Triticum monococcum
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 tttgtactaaagctagtacaaagttgag 95
|||||||||||| |||||||||||||||
Sbjct: 37 tttgtactaaagttagtacaaagttgag 64
>RF00906;MIR1122;AF325197.1/3732-3639 4565:Triticum aestivum
(bread wheat)
Length = 94
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 tttgtactaaagctagtacaaagttgag 95
|||||||||||| |||||||||||||||
Sbjct: 37 tttgtactaaagttagtacaaagttgag 64
>RF00906;MIR1122;AF091802.1/1995-2099 37682:Aegilops tauschii
Length = 105
Score = 48.1 bits (24), Expect = 3e-05
Identities = 62/72 (86%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 25 tactccctccgttctaaaataaatgtcttatacttagta-taaatttgtactaaagctag 83
|||||||||||||| |||||| ||| || | |||| ||| ||| ||||||||| || |||
Sbjct: 5 tactccctccgttccaaaatagatgactca-actttgtactaattttgtactatagttag 63
Query: 84 tacaaagttgag 95
||||||||||||
Sbjct: 64 tacaaagttgag 75
>RF00906;MIR1122;AACV01007827.1/8284-8145 39947:Oryza sativa
Japonica Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaataaa 47
||||||||||||||||||||||||
Sbjct: 4 atactccctccgttctaaaataaa 27
>RF00906;MIR1122;AP005399.3/486-590 39947:Oryza sativa Japonica
Group
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaata 45
|||||||||||||||||||||||
Sbjct: 3 tatactccctccgttctaaaata 25
>RF00906;MIR1122;AP005676.3/140751-140855 39947:Oryza sativa
Japonica Group
Length = 105
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tatactccctccgttctaaaata 45
|||||||||||||||||||||||
Sbjct: 3 tatactccctccgttctaaaata 25
>RF00906;MIR1122;FJ374624.1/2920-2820 4572:Triticum urartu
Length = 101
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 81 tagtacaaagttgagacagtaattttgagacagagggagtac 122
||||||||||||||| || | |||||| ||||||| ||||||
Sbjct: 57 tagtacaaagttgagtcacttattttgggacagagcgagtac 98
>RF00906;MIR1122;EU282770.1/593-711 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 56 acttagtataaatttgtactaaagctagtacaaagttgagacagtaattttgagacagag 115
|||||||| || ||| ||||| |||||| |||||||||||| |||||||||| |||
Sbjct: 70 acttagtacaactttatactagagctagggtaaagttgagacacctattttgagacggag 11
Query: 116 ggagta 121
||||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;FJ374625.1/3001-2870 4573:Aegilops speltoides
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 76 aaagctagtacaaagttgagacagtaattttgagacagagggagta 121
|||| ||||||||||||||| || | |||||| ||| |||||||||
Sbjct: 50 aaagttagtacaaagttgagtcacttattttgggacggagggagta 5
>RF00906;MIR1122;AAAA02003301.1/35949-35819 39946:Oryza sativa
Indica Group
Length = 131
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 atactccctccgttctaaaata 45
||||||||||||||||||||||
Sbjct: 4 atactccctccgttctaaaata 25
>RF00906;MIR1122;AL713909.5/104301-104440 4530:Oryza sativa (rice)
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 atactccctccgttctaaaata 45
||||||||||||||||||||||
Sbjct: 137 atactccctccgttctaaaata 116
