miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46679_miR1439:micropc
          Length = 97

 Score =  137 bits (69), Expect = 2e-33
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
           |||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 97  tactccctccgttccaaaataagtgtctcaagcttagtacaattttatactagagctagt 38

                                                
Query: 71  acaaagttgagacacttattttaagacggagagagta 107
           |||||||||||||| ||||||| |||||||| |||||
Sbjct: 37  acaaagttgagacagttattttgagacggagggagta 1



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
          ||||||||||||| |||||||| ||||||||
Sbjct: 1  tactccctccgtctcaaaataactgtctcaa 31




>45970_miR1439:micropc
          Length = 99

 Score =  105 bits (53), Expect = 7e-24
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
           |||||||||||||||||||||||| ||| |||||||||| ||||||| |||||  |||||
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttgagacacttattttaagacggagagagta 107
           |||||||||| ||| |||||||  ||||||| |||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 50 caactttgcactagagctagtacaaagtt 78
          |||||||| ||||||||||||||||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
          |||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68




>45205_miR1439:micropc
          Length = 99

 Score =  105 bits (53), Expect = 7e-24
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  tactccctccgtcccaaaataagtgtctcaagcttagtacaactttgcactagagctagt 70
           |||||||||||||||||||||||| ||| |||||||||| ||||||| |||||  |||||
Sbjct: 2   tactccctccgtcccaaaataagtctcttaagcttagtataactttgtactagctctagt 61

                                                
Query: 71  acaaagttgagacacttattttaagacggagagagta 107
           |||||||||| ||| |||||||  ||||||| |||||
Sbjct: 62  acaaagttgatacagttattttgggacggagggagta 98



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                       
Query: 50 caactttgcactagagctagtacaaagtt 78
          |||||||| ||||||||||||||||||||
Sbjct: 70 caactttgtactagagctagtacaaagtt 42



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 11 tactccctccgtcccaaaataagtgtctcaa 41
          |||||||||||||||||||||| ||| ||||
Sbjct: 98 tactccctccgtcccaaaataactgtatcaa 68




>46048_miR1439:micropc
          Length = 58

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                        
Query: 11 tactccctccgtcccaaaataagtgtctca 40
          ||||||||||||||||||||||||| ||||
Sbjct: 56 tactccctccgtcccaaaataagtgactca 27




>45189_miR1439:micropc
          Length = 78

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                    
Query: 11 tactccctccgtcccaaaataagtgtctcaagcttagtacaa 52
          |||||||||||| ||||||||| |||||||| ||||||||||
Sbjct: 76 tactccctccgttccaaaataactgtctcaa-cttagtacaa 36




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccaaaataagt 34
          ||||||||||||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49