miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  119 bits (60), Expect = 8e-28
 Identities = 106/120 (88%), Gaps = 1/120 (0%)
 Strand = Plus / Plus

                                                                       
Query: 21  cctccgttcctaaatataagtcttttaaagcgatttcactaagggtctacatgcggagca 80
           |||||||| ||||||||||||||||||| |||||||| |||| || |||||| |  ||||
Sbjct: 5   cctccgtttctaaatataagtcttttaa-gcgatttctctaaaggactacatacaaagca 63

                                                                       
Query: 81  aaatgattgaatctatactttaaaatatgtctatatacatccgtatctagtccactagtg 140
           |||||| |||||||| ||| |||| ||||||||||||||||||||| |||||| ||||||
Sbjct: 64  aaatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtg 123



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 17  actccctccgttcctaaatataagtctttt 46
           ||||||||||||||  ||||||||||||||
Sbjct: 162 actccctccgttccataatataagtctttt 133




>45049_miR1126:micropc
          Length = 86

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 69  acatgcggagcaaaatgattgaatctatactttaaaatatgtctatatacatccgtatct 128
           |||| |||||||||| || ||| | || ||| || | ||||||||||||||||||||| |
Sbjct: 73  acatacggagcaaaacgagtgattgtacactctacagtatgtctatatacatccgtatgt 14

                 
Query: 129 agtcca 134
           ||||||
Sbjct: 13  agtcca 8




>45189_miR1439:micropc
          Length = 78

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 aatactccctccgttcctaaa 34
          |||||||||||||||||||||
Sbjct: 1  aatactccctccgttcctaaa 21




>46433_miR1439:micropc
          Length = 153

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 15  atactccctccgttcctaaatataagtc 42
           |||||||||||||||| |||| ||||||
Sbjct: 153 atactccctccgttccaaaatgtaagtc 126