miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  202 bits (102), Expect = 7e-53
 Identities = 147/162 (90%)
 Strand = Plus / Minus

                                                                       
Query: 13  actccctccgttcctaaatataagtctttgtagagatttcactagtgggctacatacgga 72
           ||||||||||||||  ||||||||||||| |||||||| |||||| || |||||||||||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagaggactacatacgga 103

                                                                       
Query: 73  tgtatatagacatactttagagtgtacattcaatcattttgctccgtatgtagacatata 132
           |||||||||||||||||||||||||| ||||| ||||||||||  |||||||| | | ||
Sbjct: 102 tgtatatagacatactttagagtgtagattcactcattttgctttgtatgtagtccttta 43

                                                     
Query: 133 gtgaaatcgcttaaaagacttatatttaggaacggaggaagt 174
           | ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 42  gagaaatcgcttaaaagacttatatttagaaacggaggaagt 1



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 115 tccgtatgtagacatatagtgaaatcgcttaaaagacttatatttaggaacggagg 170
           ||||||||||| | | ||||| |||| || ||||||||||||||  ||||||||||
Sbjct: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagg 158



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 17 cctccgttcctaaatataagtcttt 41
          |||||||| ||||||||||||||||
Sbjct: 5  cctccgtttctaaatataagtcttt 29




>45049_miR1126:micropc
          Length = 86

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                       
Query: 62  ctacatacggatgtatatagacatactttagagtgtacattcaatcattttgctccgtat 121
           ||||||||||||||||||||||||||| ||||||||||| ||| || |||||||||||||
Sbjct: 12  ctacatacggatgtatatagacatactgtagagtgtacaatcactcgttttgctccgtat 71

             
Query: 122 gt 123
           ||
Sbjct: 72  gt 73




>44799_miR1126:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 88  tttagagtgtacattcaatcattttgctccgtatgtag 125
           ||||||||||| ||||| | ||||||||||||| ||||
Sbjct: 49  tttagagtgtagattcatttattttgctccgtaagtag 12