miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  107 bits (54), Expect = 3e-24
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctccgttcctaaatataagtattttaagatatttcattaggaatctacatacagagcaa 76
           |||||||| |||||||||||| |||||||  |||||  ||     ||||||||| |||||
Sbjct: 5   cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64

                                                             
Query: 77  aataagtgaatctacactctaaaatatgtctatatacatccgtatgtagt 126
           ||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 65  aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagt 114



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 145 aaagacttatatttaggaacggagg 169
           |||||||||||||||| ||||||||
Sbjct: 29  aaagacttatatttagaaacggagg 5




>45049_miR1126:micropc
          Length = 86

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                       
Query: 64  acatacagagcaaaataagtgaatctacactctaaaatatgtctatatacatccgtatgt 123
           |||||| ||||||||  ||||| | ||||||||| | |||||||||||||||||||||||
Sbjct: 73  acatacggagcaaaacgagtgattgtacactctacagtatgtctatatacatccgtatgt 14

              
Query: 124 agt 126
           |||
Sbjct: 13  agt 11




>44799_miR1126:micropc
          Length = 86

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 62  ctacatacagagcaaaataagtgaatctacactctaaaatatgtctatatacatccgtat 121
           |||| ||| ||||||||||| |||||||||||||||||||   |||| |||||| |||||
Sbjct: 12  ctacttacggagcaaaataaatgaatctacactctaaaatgcatctacatacattcgtat 71

                    
Query: 122 gtagttcat 130
           || ||||||
Sbjct: 72  gtggttcat 80




>46433_miR1439:micropc
          Length = 153

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 148 gacttatatttaggaacggagggagtat 175
           |||||| |||| ||||||||||||||||
Sbjct: 126 gacttacattttggaacggagggagtat 153




>45189_miR1439:micropc
          Length = 78

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 tttaggaacggagggagtat 175
           ||||||||||||||||||||
Sbjct: 21  tttaggaacggagggagtat 2