miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45049_miR1126:micropc
Length = 86
Score = 170 bits (86), Expect = 2e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 44 tccactatggactacatacggatgtatatagacatactgtagagtgtacaatcactcgtt 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccactatggactacatacggatgtatatagacatactgtagagtgtacaatcactcgtt 60
Query: 104 ttgctccgtatgttgtccgtagtaga 129
||||||||||||||||||||||||||
Sbjct: 61 ttgctccgtatgttgtccgtagtaga 86
>45994_miR1436:micropc
Length = 162
Score = 119 bits (60), Expect = 7e-28
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 7 actccttccgttcctaaatataagtcattttagagattccactat-ggactacatacgga 65
||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagaggactacatacgga 103
Query: 66 tgtatatagacatactgtagagtgtacaatcactcgttttgctccgtatgttgtcc 121
|||||||||||||||| ||||||||| | |||||| ||||||| |||||| ||||
Sbjct: 102 tgtatatagacatactttagagtgtagattcactcattttgctttgtatgtagtcc 47
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 123 tagtagaatctctaaaaatacttatattttggaacagagg 162
|||| ||||||||||||| ||||||||| |||||| ||||
Sbjct: 119 tagtggaatctctaaaaagacttatattatggaacggagg 158
