miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  125 bits (63), Expect = 1e-29
 Identities = 136/159 (85%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   actccctccgttcctaaatataagtcttttaagaagtttcactaaaatgactacatgcgg 66
           ||||||||||||||  |||||||||||||| |||  || ||||| |  |||||||| |||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagag-gactacatacgg 104

                                                                       
Query: 67  atgtatatagacatactttaaaatatagattcattcattttgctccgtatgtagccctct 126
           |||||||||||||||||||| | | |||||||| ||||||||||  |||||||| ||| |
Sbjct: 103 atgtatatagacatactttagagtgtagattcactcattttgctttgtatgtagtccttt 44

                                                  
Query: 127 agtgaaatgtctaaaaagacttatatttaggaacggagg 165
           || |||||  || ||||||||||||||||| ||||||||
Sbjct: 43  agagaaatcgcttaaaagacttatatttagaaacggagg 5



 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                       
Query: 110 tccgtatgtagccctctagtgaaatgtctaaaaagacttatatttaggaacggagggagt 169
           ||||||||||| ||||||||| ||| ||||||||||||||||||  ||||||||||||||
Sbjct: 103 tccgtatgtagtcctctagtggaatctctaaaaagacttatattatggaacggagggagt 162



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 11 cctccgttcctaaatataagtcttttaag 39
          |||||||| ||||||||||||||||||||
Sbjct: 5  cctccgtttctaaatataagtcttttaag 33




>45049_miR1126:micropc
          Length = 86

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 55  gactacatgcggatgtatatagacatactttaaaatatagattcattcattttgctccgt 114
           |||||||| |||||||||||||||||||| || | | || | ||| || |||||||||||
Sbjct: 10  gactacatacggatgtatatagacatactgtagagtgtacaatcactcgttttgctccgt 69

               
Query: 115 atgt 118
           ||||
Sbjct: 70  atgt 73




>46433_miR1439:micropc
          Length = 153

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 139 aaaaagacttatatttaggaacggagggagtat 171
           |||| |||||| |||| ||||||||||||||||
Sbjct: 121 aaaacgacttacattttggaacggagggagtat 153




>44799_miR1126:micropc
          Length = 86

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 92  tagattcattcattttgctccgtatgtag 120
           |||||||||| ||||||||||||| ||||
Sbjct: 40  tagattcatttattttgctccgtaagtag 12




>45189_miR1439:micropc
          Length = 78

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tttaggaacggagggagtat 171
           ||||||||||||||||||||
Sbjct: 21  tttaggaacggagggagtat 2