miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  155 bits (78), Expect = 1e-38
 Identities = 138/158 (87%)
 Strand = Plus / Plus

                                                                       
Query: 21  cctccgttcctaaatataagacttttttgagatttcattaaaggactacatacaaagcaa 80
           |||||||| ||||||||||| |||||  | ||||||  ||||||||||||||||||||||
Sbjct: 5   cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64

                                                                       
Query: 81  aatgaatgaatctacaccctaaagtgtgtctatatacatccgtatgtacttcattagtga 140
           ||||| ||||||||||| ||||||| |||||||||||||||||||||| | |  ||||| 
Sbjct: 65  aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgg 124

                                                 
Query: 141 aacctctaaaaagacttacatttaggaacgaagggagt 178
           || ||||||||||||||| |||  |||||| |||||||
Sbjct: 125 aatctctaaaaagacttatattatggaacggagggagt 162



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 18  ctccctccgttcctaaatataagacttttttgagatttcattaaaggactacatac 73
           |||||||||||||  |||||||| |||||| |||||| || || ||||||||||||
Sbjct: 161 ctccctccgttccataatataagtctttttagagattccactagaggactacatac 106




>45049_miR1126:micropc
          Length = 86

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 63  ggactacatacaaagcaaaatgaatgaatctacaccctaaagtgtgtctatatacatccg 122
           |||| ||||||  ||||||| || ||| | ||||| ||| ||| ||||||||||||||||
Sbjct: 78  ggacaacatacggagcaaaacgagtgattgtacactctacagtatgtctatatacatccg 19

                 
Query: 123 tatgta 128
           ||||||
Sbjct: 18  tatgta 13




>44799_miR1126:micropc
          Length = 86

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 63  ggactacatacaaagcaaaatgaatgaatctacaccctaaagtgtgtctatatacatccg 122
           ||||||| |||  |||||||| ||||||||||||| ||||| ||  |||| |||||| ||
Sbjct: 9   ggactacttacggagcaaaataaatgaatctacactctaaaatgcatctacatacattcg 68

                
Query: 123 tatgt 127
           |||||
Sbjct: 69  tatgt 73




>46433_miR1439:micropc
          Length = 153

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 148 aaaaagacttacatttaggaacgaagggagtat 180
           |||| ||||||||||| |||||| |||||||||
Sbjct: 121 aaaacgacttacattttggaacggagggagtat 153