miRNEST 2.0, an integrative microRNA resource :: BLAST
>46836_miR1439:micropc
Length = 86
Score = 83.8 bits (42), Expect = 3e-17
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 17 tactccctccgtcccataatataagagcgtttttgacactacactagtgttaaaaa-aca 75
||||||||||||| || |||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 1 tactccctccgtctcaaaatataagagcgtttttggcactacactagtgtaaaaaatgct 60
Query: 76 cttatattttgagatggagggggtat 101
||||||||||| || |||||| ||||
Sbjct: 61 cttatattttgggacggagggagtat 86
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 17 tactccctccgtcccataatataagagcgtttttgacacta 57
|||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 85 tactccctccgtcccaaaatataagagcattttttacacta 45
>45676_miR1436:micropc
Length = 85
Score = 67.9 bits (34), Expect = 2e-12
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt-gacactacactagtgttaaa 70
|||||||||| ||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 85 actccctccgccccataatataagtacgttttttgacactacactagtgttaaa 32
>46560_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgttttt 50
|||||||||||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46744_miR1436:micropc
Length = 83
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgtttttg 51
||||||||||||||||||||||||||| ||||||
Sbjct: 83 actccctccgtcccataatataagagcatttttg 50
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 18 actccctccgtcccataatataagagcgttttt 50
||||||||||| ||||||||||||| |||||||
Sbjct: 1 actccctccgttccataatataagaacgttttt 33
>46280_miR1436:micropc
Length = 97
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgtttttgacactacactagtgttaaaaaac 74
|||||||||||| |||||||||| | |||||||||||||| |||||||||||||
Sbjct: 97 actccctccgtctcataatataaaatactttttgacactacatcagtgttaaaaaac 41
>46194_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgtttttg 51
|||||||||||| |||||||||| ||||||||||
Sbjct: 83 actccctccgtctcataatataaaagcgtttttg 50
>46150_miR1130:micropc
Length = 75
Score = 50.1 bits (25), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 22 cctccgtcccataatataagagcgtttttgacactacactagtgttaaaaaac 74
||||||||||||||| ||||| ||||||||| |||||||| || |||||||
Sbjct: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaac 53
>45479_miR1436:micropc
Length = 83
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataagagcgtttttgacactacacta 62
||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 83 actcccttcgtcccataatgtaagatgttttttgacactacacta 39
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 18 actccctccgtcccataatataag 41
||||||||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46658_miR1436:micropc
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 20 tccctccgtcccataatataagagcgtttttgacactacactagtgttaaaaaac 74
|||||||||||| |||| ||||| |||||||||||||| ||| || |||||||
Sbjct: 1 tccctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaac 55
>46187_miR1132:micropc
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 19 ctccctccgtcccataatataagagcgtttttgacac-tacactagtgttaaaaaac 74
|||||||||||||||||| ||||| ||||| |||| ||||||||||| ||| |||
Sbjct: 1 ctccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaac 57
