miRNEST 2.0, an integrative microRNA resource :: BLAST
>46744_miR1436:micropc
Length = 83
Score = 71.9 bits (36), Expect = 1e-13
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt-caagctatgttagcttgagaaacgat 80
||||||||||||||||||||||||| | ||||| ||||| ||||||||||| ||||| |
Sbjct: 83 actccctccgtcccataatataagagcatttttgtaagct-tgttagcttgaaaaacgtt 25
Query: 81 cttatattgtgggacggtgggagt 104
|||||||| ||| |||| ||||||
Sbjct: 24 cttatattatggaacggagggagt 1
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 22 actccctccgtcccataatataagatcgtttttcaagcta 61
||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 1 actccctccgttccataatataagaacgtttttcaagcta 40
>46560_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
||||||||||||||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataag 45
||||||||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>46836_miR1439:micropc
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 22 actccctccgtcccataatataagatcgttttt 54
|||||||||||| || ||||||||| |||||||
Sbjct: 2 actccctccgtctcaaaatataagagcgttttt 34
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||| |||||||||
Sbjct: 84 actccctccgtcccaaaatataaga 60
>46428_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||||||| |||||
Sbjct: 69 actccctccgtcccataatgtaaga 45
>46264_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||||||| |||||
Sbjct: 69 actccctccgtcccataatgtaaga 45
>46261_miR1120:micropc
Length = 76
Score = 42.1 bits (21), Expect = 1e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 57 agctatgttagcttgagaaacgatcttatattgtgggacgg 97
|||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 35 agctatgttagcttga-aaacattcttatattatgggacgg 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 27 ctccgtcccataatataaga 46
||||||||||||||||||||
Sbjct: 76 ctccgtcccataatataaga 57
>46194_miR1436:micropc
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
|||||||||||| |||||||||| | |||||||
Sbjct: 83 actccctccgtctcataatataaaagcgttttt 51
>45676_miR1436:micropc
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataagatcgttttt 54
|||||||||| ||||||||||||| |||||||
Sbjct: 85 actccctccgccccataatataagtacgttttt 53
>45393_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||||||| |||||
Sbjct: 69 actccctccgtcccataatgtaaga 45
>45005_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||||||| |||||
Sbjct: 69 actccctccgtcccataatgtaaga 45
>44928_miR1436:micropc
Length = 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataaga 46
||||||||||||||||||| |||||
Sbjct: 69 actccctccgtcccataatgtaaga 45
>46187_miR1132:micropc
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 ctccctccgtcccataatataaga 46
|||||||||||||||||| |||||
Sbjct: 1 ctccctccgtcccataatgtaaga 24
>45994_miR1436:micropc
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 actccctccgtcccataatataag 45
||||||||||| ||||||||||||
Sbjct: 162 actccctccgttccataatataag 139
