miRNEST 2.0, an integrative microRNA resource :: BLAST
>46048_miR1439:micropc
Length = 58
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 106 tgagtcacttattttgggacggagggagta 135
||||||||||||||||||||||||||||||
Sbjct: 27 tgagtcacttattttgggacggagggagta 56
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactca 69
||||||||||| | |||||||||||||||
Sbjct: 55 actccctccgtcccaaaataagtgactca 27
>46754_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46594_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46493_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46463_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46315_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46176_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>45675_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>45656_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>45535_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>44790_miR1439:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttgagt 100
||||||||||||| ||||| |||| ||| ||||||||||||||||| |||| ||||||
Sbjct: 85 actccctccgttccaaaatggatgacccaagtttgtactaaagttagtacaaagttgagt 26
Query: 101 c 101
|
Sbjct: 25 c 25
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 41 actccctccgttcaaaaataagtgactcaattttgtactaaagttagtgcaaacttg 97
||||||||||||| | |||| |||||||| |||||||||| ||||| ||||||||
Sbjct: 2 actccctccgttccagaatagatgactcaactttgtactaactttagtacaaacttg 58
>46157_miR1439:micropc
Length = 88
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgta 77
||||||||||||| |||||| ||||||||| ||||||
Sbjct: 86 actccctccgttccaaaataggtgactcaactttgta 50
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||||||| |||||||| ||||||||||||
Sbjct: 57 ttgagtcacctattttggaacggagggagta 87
>45970_miR1439:micropc
Length = 99
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 112 acttattttgggacggagggagtac 136
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtac 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagta 98
>45205_miR1439:micropc
Length = 99
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 112 acttattttgggacggagggagtac 136
|||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtac 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 114 ttattttgggacggagggagta 135
||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagta 98
>44862_miR1439:micropc
Length = 88
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaattttgta 77
||||||||||||| |||||| ||||||||| ||||||
Sbjct: 86 actccctccgttccaaaataggtgactcaactttgta 50
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||||||| |||||||| ||||||||||||
Sbjct: 57 ttgagtcacctattttggaacggagggagta 87
>45320_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 acttattttgggacggagggagta 135
||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72
>45276_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 acttattttgggacggagggagta 135
||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72
>45016_miR1439:micropc
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 112 acttattttgggacggagggagta 135
||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72
>46679_miR1439:micropc
Length = 97
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 105 ttgagtcacttattttgggacggagggagta 135
||||| |||||||||||| ||||||||||||
Sbjct: 67 ttgagacacttattttggaacggagggagta 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 41 actccctccgttcaaaaataagtgactcaa 70
||||||||||||| |||||||||| |||||
Sbjct: 96 actccctccgttccaaaataagtgtctcaa 67
