miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45950_miR159:micropc
Length = 173
Score = 343 bits (173), Expect = 3e-95
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcct 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcct 173
>46773_miR159:micropc
Length = 172
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 172
>46547_miR319:micropc
Length = 172
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 172
>45899_miR159:micropc
Length = 170
Score = 337 bits (170), Expect = 2e-93
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 14 gagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctctt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctctt 60
Query: 74 tcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatgaa 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatgaa 120
Query: 134 ggtggagctgtggttcgatcatccttttgggattggggtgaagggagctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggtggagctgtggttcgatcatccttttgggattggggtgaagggagctc 170
>45517_miR159:micropc
Length = 173
Score = 287 bits (145), Expect = 2e-78
Identities = 166/173 (95%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcct 185
||||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcct 173
>46781_miR159:micropc
Length = 172
Score = 285 bits (144), Expect = 6e-78
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 184
||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
>46103_miR319:micropc
Length = 172
Score = 285 bits (144), Expect = 6e-78
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 13 ggagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctct 72
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctct 60
Query: 73 ttcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatga 132
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ttcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatga 120
Query: 133 aggtggagctgtggttcgatcatccttttgggattggggtgaagggagctcc 184
||||||||| ||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 121 aggtggagccatggtttgatcatctttttgggattggggtgaagggagctcc 172
>45527_miR159:micropc
Length = 170
Score = 281 bits (142), Expect = 1e-76
Identities = 163/170 (95%)
Strand = Plus / Plus
Query: 14 gagctctctatcgcctcaaccctgaaaggaaatcgatcatggtggttcatggctgctctt 73
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctctctatcgcctcgaccctgaaaggaaatcgatcatggtggttcatggctgctctt 60
Query: 74 tcatgaatgcctgtaggtgcaccaatggtgttgtagtgtgcattctaaggttagcatgaa 133
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 tcatgaatgcttgtaggtgcaccaatgttgttgtagtgtgcattctaaggttagcatgaa 120
Query: 134 ggtggagctgtggttcgatcatccttttgggattggggtgaagggagctc 183
|||||||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 121 ggtggagccatggtttgatcatctttttgggattggggtgaagggagctc 170
>46816_miR159:micropc
Length = 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 138 cttttggtattggagtgaagggagctcc 165
>46567_miR319:micropc
Length = 164
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 137 cttttggtattggagtgaagggagctcc 164
>46260_miR159:micropc
Length = 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 138 cttttggtattggagtgaagggagctcc 165
>46067_miR159:micropc
Length = 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 138 cttttggtattggagtgaagggagctcc 165
>46003_miR319:micropc
Length = 164
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 137 cttttggtattggagtgaagggagctcc 164
>45716_miR319:micropc
Length = 164
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 137 cttttggtattggagtgaagggagctcc 164
>45689_miR319:micropc
Length = 164
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 157 cttttgggattggggtgaagggagctcc 184
||||||| ||||| ||||||||||||||
Sbjct: 137 cttttggtattggagtgaagggagctcc 164
