miRNEST 2.0, an integrative microRNA resource :: BLAST
>46744_miR1436:micropc
Length = 83
Score = 165 bits (83), Expect = 8e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 12 actccctccgttccataatataagaacgtttttcaagctaacaagcttacaaaaatgctc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actccctccgttccataatataagaacgtttttcaagctaacaagcttacaaaaatgctc 60
Query: 72 ttatattatgggacggagggagt 94
|||||||||||||||||||||||
Sbjct: 61 ttatattatgggacggagggagt 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 70 tcttatattatgggacggagggagt 94
||||||||||||| |||||||||||
Sbjct: 25 tcttatattatggaacggagggagt 1
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataaga 36
||||||||||| |||||||||||||
Sbjct: 83 actccctccgtcccataatataaga 59
>46836_miR1439:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagta 95
||||||||||||||||| ||||||||||||||||
Sbjct: 52 aaaaatgctcttatattttgggacggagggagta 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 61 caaaaatgctcttatattatgggacggagggagta 95
|||||| ||||||||||| || |||||||||||||
Sbjct: 35 caaaaacgctcttatattttgagacggagggagta 1
>46560_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46416_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46351_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46296_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46229_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46082_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45853_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45812_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45616_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45608_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45459_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45450_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45382_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>45149_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>44955_miR1436:micropc
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 62 aaaaatgctcttatattatgggacggagggagt 94
||||| |||||||||||||||||||||||||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataagaacgttttt 44
||||||||||| ||||||||||||| |||||||
Sbjct: 80 actccctccgtcccataatataagagcgttttt 48
>46683_miR1436:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 cttatattatgggacggagggagt 94
||||||||||||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataag 35
||||||||||| ||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
>45994_miR1436:micropc
Length = 162
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatataag 35
||||||||||||||||||||||||
Sbjct: 162 actccctccgttccataatataag 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 71 cttatattatgggacggagggagt 94
|||||||||||| |||||||||||
Sbjct: 139 cttatattatggaacggagggagt 162
>46825_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatata 33
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46353_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatata 33
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
>46261_miR1120:micropc
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 17 ctccgttccataatataagaacgtttttcaagctaaca 54
|||||| |||||||||||||| | ||||||||||||||
Sbjct: 76 ctccgtcccataatataagaatg-ttttcaagctaaca 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tcttatattatgggacggag 89
||||||||||||||||||||
Sbjct: 57 tcttatattatgggacggag 76
>46194_miR1436:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 61 caaaaatgctcttatattatgggacggagggagt 94
|||||| ||| |||||||||| ||||||||||||
Sbjct: 50 caaaaacgcttttatattatgagacggagggagt 83
>45775_miR1436:micropc
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 12 actccctccgttccataatata 33
||||||||||||||||||||||
Sbjct: 89 actccctccgttccataatata 68
