miRNEST 2.0, an integrative microRNA resource :: BLAST
>45814_miR408:micropc
Length = 85
Score = 105 bits (53), Expect = 9e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 32 agactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctcca 91
|||| |||||||||||||||||||||||||||| ||| ||| || ||||||||||| |
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 60
Query: 92 cccatgcactgcctcttccctggct 116
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>45593_miR408:micropc
Length = 85
Score = 105 bits (53), Expect = 9e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 32 agactgggaacaggcagagcatggatggagctattaatggaaatatctgttttggctcca 91
|||| |||||||||||||||||||||||||||| ||| ||| || ||||||||||| |
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctcta 60
Query: 92 cccatgcactgcctcttccctggct 116
|||||||||||||||||||||||||
Sbjct: 61 cccatgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 37 gggaacaggcagagcatggatggagctattaatggaaatatctgttttggctccacccat 96
|||||||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctacccat 64
Query: 97 gcactgcctcttccctggc 115
|||||||||||||||||||
Sbjct: 65 gcactgcctcttccctggc 83
>46401_miR408:micropc
Length = 83
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 37 gggaacaggcagagcatggatggagctattaatggaaatatctgttttggctccacccat 96
|||||||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctacccat 64
Query: 97 gcactgcctcttccctggc 115
|||||||||||||||||||
Sbjct: 65 gcactgcctcttccctggc 83
>46359_miR408:micropc
Length = 85
Score = 101 bits (51), Expect = 1e-22
Identities = 76/83 (91%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 35 ctgggaacaggcagagcatggatggagctattaatggaaa-tatctgttttggctccacc 93
|||||||||||||||||||||||| ||||||||| |||| | |||||||||||| |||
Sbjct: 3 ctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcact 62
Query: 94 catgcactgcctcttccctggct 116
|||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggct 85
>46052_miR408:micropc
Length = 83
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 37 gggaacaggcagagcatggatggagctattaatggaaatatctgttttggctccacccat 96
|||||||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctacccat 64
Query: 97 gcactgcctcttccctggc 115
|||||||||||||||||||
Sbjct: 65 gcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 37 gggaacaggcagagcatggatggagctattaatggaaatatctgttttggctccacccat 96
|||||||||||||||||||||||||||| ||| ||| || ||||||||||| ||||||
Sbjct: 5 gggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctacccat 64
Query: 97 gcactgcctcttccctggc 115
|||||||||||||||||||
Sbjct: 65 gcactgcctcttccctggc 83
>46309_miR408:micropc
Length = 83
Score = 99.6 bits (50), Expect = 6e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 35 ctgggaacaggcagagcatggatggagctattaatggaaa-tatctgttttggctccacc 93
|||||||||||||||||||||||| ||||||||| |||| | |||||||||||| |||
Sbjct: 2 ctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcact 61
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 99.6 bits (50), Expect = 6e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 35 ctgggaacaggcagagcatggatggagctattaatggaaa-tatctgttttggctccacc 93
|||||||||||||||||||||||| ||||||||| |||| | |||||||||||| |||
Sbjct: 2 ctgggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcact 61
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>45398_miR408:micropc
Length = 89
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggct 116
||||| ||||||||| |||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggc 115
||||| ||||||||| ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggc 115
||||| ||||||||| ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45531_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggct 116
||||| |||||| || |||||||||||||||||||||||
Sbjct: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
>45394_miR408:micropc
Length = 112
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 74 atatctgttttggctccacccatgcactgcctcttccctggct 116
||||||||| ||||| | | |||||||||||||||||||||||
Sbjct: 70 atatctgttgtggctacgctcatgcactgcctcttccctggct 112
>46728_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggc 115
||||| |||||| || ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 78 ctgttttggctccacccatgcactgcctcttccctggc 115
||||| |||||| || ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>44968_miR408:micropc
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 74 atatctgttttggctccacccatgcactgcctcttccctggc 115
||||||||| ||||| | | ||||||||||||||||||||||
Sbjct: 69 atatctgttgtggctacgctcatgcactgcctcttccctggc 110
>45949_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttggctccacccatgcactgcctcttccctggc 115
|||| |||||| || ||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 aggcagagcatggatggagctat 65
|||||||||||||||||||||||
Sbjct: 10 aggcagagcatggatggagctat 32
>45551_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttggctccacccatgcactgcctcttccctggc 115
|||| |||||| || ||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 aggcagagcatggatggagctat 65
|||||||||||||||||||||||
Sbjct: 10 aggcagagcatggatggagctat 32
>44861_miR408:micropc
Length = 121
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 76 atctgttttggctccacccatgcactgcctcttccctggct 116
||||||| ||||| | | |||||||||||||||||||||||
Sbjct: 81 atctgttgtggctacgctcatgcactgcctcttccctggct 121
>44821_miR408:micropc
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 76 atctgttttggctccacccatgcactgcctcttccctggc 115
||||||| ||||| | | ||||||||||||||||||||||
Sbjct: 80 atctgttgtggctacgctcatgcactgcctcttccctggc 119
