miRNEST 2.0, an integrative microRNA resource :: BLAST
>45131_miR444:micropc
Length = 108
Score = 176 bits (89), Expect = 2e-45
Identities = 103/108 (95%)
Strand = Plus / Plus
Query: 5 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 65 ctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
>46185_miR444:micropc
Length = 108
Score = 174 bits (88), Expect = 9e-45
Identities = 103/108 (95%)
Strand = Plus / Plus
Query: 5 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 65 ctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaaatt 48
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 103 caagcttgagacagcaactgcacaacttgcaagaaaatt 65
>45238_miR444:micropc
Length = 108
Score = 174 bits (88), Expect = 9e-45
Identities = 103/108 (95%)
Strand = Plus / Plus
Query: 5 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatac 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccatac 60
Query: 65 ctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgatcattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>44872_miR444:micropc
Length = 106
Score = 170 bits (86), Expect = 1e-43
Identities = 101/106 (95%)
Strand = Plus / Plus
Query: 6 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacc 65
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 60
Query: 66 tatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgc 111
|| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gataattttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaaatt 48
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 102 caagcttgagacagcaactgcacaacttgcaagaaaatt 64
>45525_miR444:micropc
Length = 94
Score = 155 bits (78), Expect = 8e-39
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 12 agctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatgat 71
|||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 94 agctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataat 35
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagct 105
||||||||||||||||||||||||||||||||||
Sbjct: 34 tttcttgcaagttgtgcagttgttgtctcaagct 1
>45230_miR444:micropc
Length = 96
Score = 153 bits (77), Expect = 3e-38
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
>46476_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
|||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45734_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
|||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
|||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45562_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgctgtctcaagctt 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaatt 48
||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 96 aagcttgagacagcaactgcacaacttgcaagaaaatt 59
>45135_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45024_miR444:micropc
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcagaccatacctatga 70
|||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 96 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgataa 37
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagttgtgcagttgttgtctcaagctt 1
>45828_miR444:micropc
Length = 114
Score = 133 bits (67), Expect = 3e-32
Identities = 102/114 (89%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 5 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt------ggttttcaga 58
||||||||||| | ||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 1 ggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcaga 60
Query: 59 ccatacctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 69 gattttcttgcaagttgtgcagttgttgtctcaagcttg 107
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 44 gattttcttgcaagatgtgcagttgctgccacaagcttg 6
>45451_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 7e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcagaccataccta 67
|||||||||||||||||||||||| |||||||||||| | |||||| | |||| |
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 68 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45168_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 7e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcagaccataccta 67
|||||||||||||||||||||||| |||||||||||| | |||||| | |||| |
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 68 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 112
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>46210_miR444:micropc
Length = 102
Score = 109 bits (55), Expect = 4e-25
Identities = 84/94 (89%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 19 ggcagcaactgcatatcttgcaagaaaatt------ggttttcagaccatacctatgatt 72
||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 9 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 68
Query: 73 ttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||
Sbjct: 69 ttcttgcaagttgtgcagttgttgtctcaagctt 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 69 gattttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||||| |||||||||| || | |||||||
Sbjct: 38 gattttcttgcaagatgtgcagttgctgccacaagctt 1
>45175_miR444:micropc
Length = 98
Score = 101 bits (51), Expect = 1e-22
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcagaccatacctat 68
||||||||||||||||||||||| |||||||||||| | |||||| | |||| ||
Sbjct: 98 aagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccgat 39
Query: 69 gattttcttgcaagttgtgcagttgttgtctcaagctt 106
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gattttcttgcaagttgtgcagttgttgtctcaagctt 1
>45976_miR444:micropc
Length = 133
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 65 ctatgattttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 92 ctatgactttcttgcaagttgtgcagttgttgcctcaagctt 133
>46669_miR444:micropc
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 55 cagaccatacctatgattttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||| | || ||||||||||||||||||||||||| |||||||||
Sbjct: 85 cagaccatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
>46544_miR444:micropc
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 55 cagaccatacctatgattttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||| | || ||||||||||||||||||||||||| |||||||||
Sbjct: 85 cagaccatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
>45742_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaa 46
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45712_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 71 ttttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaaa 46
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45665_miR444:micropc
Length = 111
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 111
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaa 45
|||||| ||||||||||||||| | |||||||||||
Sbjct: 107 caagcttgaggcagcaactgcacaacttgcaagaaa 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagcttg 107
|||||||||||| ||||||||||| |||| |||||
Sbjct: 40 tttcttgcaagtaatgcagttgttgcctcatgcttg 5
>46412_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||||||||||||| ||||||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgctgtctcaagctt 1
>46601_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 111
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaa 45
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>45144_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 111
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaa 45
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>46299_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45960_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45334_miR444:micropc
Length = 101
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||||||||||||| || |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaa 45
||||| ||||||||||||||| | |||||||||||
Sbjct: 101 aagcttgaggcagcaactgcacaacttgcaagaaa 67
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 111
|||||||||||| |||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 caagctagaggcagcaactgcatatcttgcaagaaa 45
|||||| |||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcatgacttgcaagaaa 112
>46182_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
>45904_miR444:micropc
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 aagctagaggcagcaactgcatatcttgcaagaaa 45
||||| |||||||||||||||| |||||||||||
Sbjct: 141 aagcttgaggcagcaactgcatgacttgcaagaaa 107
>44855_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 72 tttcttgcaagttgtgcagttgttgtctcaagctt 106
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
