miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45622_miR528:micropc
          Length = 86

 Score = 81.8 bits (41), Expect = 1e-16
 Identities = 78/90 (86%), Gaps = 4/90 (4%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggaaggggcatgcagaggagcaggacctccggttggaagccgacctgtgtgtgctaccc 71
           ||||||||||||||||||||||||||  |  |||||||||||||||    || |||||||
Sbjct: 1   tggaaggggcatgcagaggagcaggaggtttggttggaagccgacc----tgcgctaccc 56

                                         
Query: 72  tcgctcactctcctgtgcctgcctcttcca 101
           ||| |  |||||||||||||||||||||||
Sbjct: 57  tcggttgctctcctgtgcctgcctcttcca 86




>45035_miR528:micropc
          Length = 92

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 78/92 (84%), Gaps = 2/92 (2%)
 Strand = Plus / Plus

                                                                       
Query: 12  tggaaggggcatgcagaggagcaggacctccggttggaagccgacctgtg-tgtgctacc 70
           ||||||||||||||||||||||| ||     || |  ||||||||||||| | |||||||
Sbjct: 1   tggaaggggcatgcagaggagcacgaggcttggctaaaagccgacctgtgctatgctacc 60

                                           
Query: 71  c-tcgctcactctcctgtgcctgcctcttcca 101
           | |||||  |||||||||||||||||||||||
Sbjct: 61  cctcgctggctctcctgtgcctgcctcttcca 92




>45655_miR528:micropc
          Length = 84

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 12 tggaaggggcatgcagaggagcagga 37
          ||||||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagcagga 26




>46551_miR528:micropc
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 70  cctcgctcactctcctgtgcctgcctcttcca 101
           |||||||  |||||||||||||||||||||||
Sbjct: 51  cctcgctggctctcctgtgcctgcctcttcca 82




>44942_miR528:micropc
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 70  cctcgctcactctcctgtgcctgcctcttcca 101
           |||||||  |||||||||||||||||||||||
Sbjct: 51  cctcgctggctctcctgtgcctgcctcttcca 82



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggaaggggcatgcagaggagca 34
          |||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagca 23




>46253_miR528:micropc
          Length = 117

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tggaaggggcatgcagaggagca 34
          |||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagca 23



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 79  ctctcctgtgcctgcctcttcca 101
           |||||||||||||||||||||||
Sbjct: 95  ctctcctgtgcctgcctcttcca 117




>46295_miR528:micropc
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tggaaggggcatgcagaggag 32
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21