miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46763_miR164:micropc
          Length = 102

 Score =  202 bits (102), Expect = 5e-53
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 16  tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 60

                                                     
Query: 76  ttcaattgattgagttagttcttcatgtgcccctcttcccca 117
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttcaattgattgagttagttcttcatgtgcccctcttcccca 102




>46528_miR164:micropc
          Length = 102

 Score =  202 bits (102), Expect = 5e-53
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 16  tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggagaagcagggcacgtgcattactaactcaccaaccataaaaaacactgacacataaa 60

                                                     
Query: 76  ttcaattgattgagttagttcttcatgtgcccctcttcccca 117
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttcaattgattgagttagttcttcatgtgcccctcttcccca 102




>46647_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>46639_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>46445_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>46101_miR164:micropc
          Length = 137

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 86  tgagttagttcttcatgtgcccctcttcccca 117
           |||||||||||||||||||||  |||||||||
Sbjct: 106 tgagttagttcttcatgtgcctgtcttcccca 137




>46047_miR164:micropc
          Length = 137

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 86  tgagttagttcttcatgtgcccctcttcccca 117
           |||||||||||||||||||||  |||||||||
Sbjct: 106 tgagttagttcttcatgtgcctgtcttcccca 137




>45465_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>45324_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>44832_miR164:micropc
          Length = 168

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattactaactca 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 85  ttgagttagttcttcatgtgcccctcttcccca 117
           |||||||| |||||||||||||| |||||||||
Sbjct: 136 ttgagttatttcttcatgtgcccttcttcccca 168




>45579_miR164:micropc
          Length = 196

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 16 tggagaagcagggcacgtgcattactaactca 47
          ||||||||||||||||||| ||||||||||||
Sbjct: 1  tggagaagcagggcacgtgtattactaactca 32




>45452_miR164:micropc
          Length = 146

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 86  tgagttagttcttcatgtgcccctcttcccca 117
           ||||||||| ||||||||||||||||||||||
Sbjct: 115 tgagttagtccttcatgtgcccctcttcccca 146



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 16 tggagaagcagggcacgtgcattactaactcaccaac 52
          ||||||||||||||||||||| | |||||||| ||||
Sbjct: 1  tggagaagcagggcacgtgcaattctaactcatcaac 37




>44812_miR164:micropc
          Length = 146

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 86  tgagttagttcttcatgtgcccctcttcccca 117
           ||||||||| ||||||||||||||||||||||
Sbjct: 115 tgagttagtccttcatgtgcccctcttcccca 146



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 16 tggagaagcagggcacgtgcattactaactcaccaac 52
          ||||||||||||||||||||| | |||||||| ||||
Sbjct: 1  tggagaagcagggcacgtgcaattctaactcatcaac 37




>45892_miR164:micropc
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tggagaagcagggcacgtgcattac 40
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>45686_miR164:micropc
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tggagaagcagggcacgtgcattac 40
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>45583_miR164:micropc
          Length = 90

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tggagaagcagggcacgtgcattac 40
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>45738_miR164:micropc
          Length = 152

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tggagaagcagggcacgtgcat 37
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>45287_miR164:micropc
          Length = 152

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tggagaagcagggcacgtgcat 37
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>45052_miR164:micropc
          Length = 152

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tggagaagcagggcacgtgcat 37
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22