miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46456_miR162:micropc
          Length = 89

 Score =  170 bits (86), Expect = 2e-43
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 63

                                     
Query: 83  accgatcgataaacctctgcatccag 108
           ||||||||||||||||||||||||||
Sbjct: 64  accgatcgataaacctctgcatccag 89




>45283_miR162:micropc
          Length = 87

 Score =  168 bits (85), Expect = 6e-43
 Identities = 85/85 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacgaaaaacatga 62

                                    
Query: 83  accgatcgataaacctctgcatcca 107
           |||||||||||||||||||||||||
Sbjct: 63  accgatcgataaacctctgcatcca 87




>46039_miR162:micropc
          Length = 92

 Score = 75.8 bits (38), Expect = 7e-15
 Identities = 80/91 (87%), Gaps = 6/91 (6%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggaggcagcggttcatcgatctcttcctggccaatttt-ttgt----ttagcacgaaaaa 77
           ||||||||||||||||||||||||||||||   ||||| ||||    ||||||| ||| |
Sbjct: 3   ggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcac-aaaca 61

                                          
Query: 78  catgaaccgatcgataaacctctgcatccag 108
           |||||| ||||||||||||||||||||||||
Sbjct: 62  catgaatcgatcgataaacctctgcatccag 92




>46504_miR162:micropc
          Length = 90

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 79/90 (87%), Gaps = 6/90 (6%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggaggcagcggttcatcgatctcttcctggccaatttt-ttgt----ttagcacgaaaaa 77
           ||||||||||||||||||||||||||||||   ||||| ||||    ||||||| ||| |
Sbjct: 2   ggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcac-aaaca 60

                                         
Query: 78  catgaaccgatcgataaacctctgcatcca 107
           |||||| |||||||||||||||||||||||
Sbjct: 61  catgaatcgatcgataaacctctgcatcca 90




>46549_miR162:micropc
          Length = 92

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 77/91 (84%), Gaps = 6/91 (6%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggaggcagcggttcatcgatctcttcctggccaattttttgtt-----tagcacgaaaaa 77
           ||||||||||||||||||||||||||||||   ||||||||||       |||  ||| |
Sbjct: 3   ggaggcagcggttcatcgatctcttcctgg-agattttttgttctgaactgcaataaaca 61

                                          
Query: 78  catgaaccgatcgataaacctctgcatccag 108
           |||||| ||||||||||||||||||||||||
Sbjct: 62  catgaatcgatcgataaacctctgcatccag 92




>45903_miR162:micropc
          Length = 90

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 23 ggaggcagcggttcatcgatctcttcctgg 52
          ||||||||||||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatctcttcctgg 31




>46511_miR162:micropc
          Length = 89

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatctcttcctg 30




>46096_miR162:micropc
          Length = 87

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatctcttcctg 31



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 67  tcgataaacctctgcatccag 87




>45921_miR162:micropc
          Length = 110

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatctcttcctg 31



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 81  gaaccgatcgataaacctctgcatccag 108
           |||| |||||||||||||||||||||||
Sbjct: 83  gaacagatcgataaacctctgcatccag 110




>45545_miR162:micropc
          Length = 91

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatctcttcctg 31




>45508_miR162:micropc
          Length = 108

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatctcttcctg 30



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 81  gaaccgatcgataaacctctgcatcca 107
           |||| ||||||||||||||||||||||
Sbjct: 82  gaacagatcgataaacctctgcatcca 108




>44920_miR162:micropc
          Length = 85

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 23 ggaggcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatctcttcctg 30



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 66  tcgataaacctctgcatcca 85




>46817_miR162:micropc
          Length = 93

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 77  acatgaaccgatcgataaacctctgcatccag 108
           ||||||| ||||||||||||||||||||||||
Sbjct: 62  acatgaatcgatcgataaacctctgcatccag 93



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatc 23




>46676_miR162:micropc
          Length = 97

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 78  catgaaccgatcgataaacctctgcatccag 108
           |||||| ||||||||||||||||||||||||
Sbjct: 67  catgaatcgatcgataaacctctgcatccag 97



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatc 23




>46597_miR162:micropc
          Length = 91

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 77  acatgaaccgatcgataaacctctgcatcca 107
           ||||||| |||||||||||||||||||||||
Sbjct: 61  acatgaatcgatcgataaacctctgcatcca 91



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatc 22




>44934_miR162:micropc
          Length = 97

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 78  catgaaccgatcgataaacctctgcatccag 108
           |||||| ||||||||||||||||||||||||
Sbjct: 67  catgaatcgatcgataaacctctgcatccag 97



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatc 23




>46394_miR162:micropc
          Length = 95

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 78  catgaaccgatcgataaacctctgcatcca 107
           |||||| |||||||||||||||||||||||
Sbjct: 66  catgaatcgatcgataaacctctgcatcca 95



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatc 22




>46364_miR162:micropc
          Length = 95

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 78  catgaaccgatcgataaacctctgcatcca 107
           |||||| |||||||||||||||||||||||
Sbjct: 66  catgaatcgatcgataaacctctgcatcca 95



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 23 ggaggcagcggttcatcgatc 43
          |||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatc 22




>46026_miR162:micropc
          Length = 87

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 75  aaacatgaaccgatcgataaacctctgcatccag 108
           ||||||||| || |||||||||||||||||||||
Sbjct: 54  aaacatgaatcggtcgataaacctctgcatccag 87




>46792_miR162:micropc
          Length = 83

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 gcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||
Sbjct: 6  gcagcggttcatcgatctcttcctg 30



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 64  tcgataaacctctgcatcca 83




>46557_miR162:micropc
          Length = 85

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 75  aaacatgaaccgatcgataaacctctgcatcca 107
           ||||||||| || ||||||||||||||||||||
Sbjct: 53  aaacatgaatcggtcgataaacctctgcatcca 85




>44984_miR162:micropc
          Length = 85

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 gcagcggttcatcgatctcttcctg 51
          |||||||||||||||||||||||||
Sbjct: 7  gcagcggttcatcgatctcttcctg 31



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 65  tcgataaacctctgcatccag 85




>45991_miR162:micropc
          Length = 108

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  cgatcgataaacctctgcatccag 108
           ||||||||||||||||||||||||
Sbjct: 85  cgatcgataaacctctgcatccag 108




>45901_miR162:micropc
          Length = 111

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  cgatcgataaacctctgcatccag 108
           ||||||||||||||||||||||||
Sbjct: 88  cgatcgataaacctctgcatccag 111




>45749_miR162:micropc
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 85  cgatcgataaacctctgcatccag 108
           ||||||||||||||||||||||||
Sbjct: 76  cgatcgataaacctctgcatccag 99




>46457_miR162:micropc
          Length = 109

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 85  cgatcgataaacctctgcatcca 107
           |||||||||||||||||||||||
Sbjct: 87  cgatcgataaacctctgcatcca 109




>46090_miR162:micropc
          Length = 97

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 85  cgatcgataaacctctgcatcca 107
           |||||||||||||||||||||||
Sbjct: 75  cgatcgataaacctctgcatcca 97




>45617_miR162:micropc
          Length = 88

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 78  catgaaccgatcgataaacctctgcatccag 108
           |||||| || |||||||||||||||||||||
Sbjct: 58  catgaatcggtcgataaacctctgcatccag 88



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 ggaggcagcggttcatcgatct 44
          ||||||||||||||||||||||
Sbjct: 3  ggaggcagcggttcatcgatct 24




>44845_miR162:micropc
          Length = 106

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 85  cgatcgataaacctctgcatcca 107
           |||||||||||||||||||||||
Sbjct: 84  cgatcgataaacctctgcatcca 106




>45757_miR162:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 23 ggaggcagcggttcatcgatct 44
          ||||||||||||||||||||||
Sbjct: 2  ggaggcagcggttcatcgatct 23



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 78  catgaaccgatcgataaacctctgcatcca 107
           |||||| || ||||||||||||||||||||
Sbjct: 57  catgaatcggtcgataaacctctgcatcca 86




>46628_miR162:micropc
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136




>46169_miR162:micropc
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136




>45084_miR162:micropc
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136




>44890_miR162:micropc
          Length = 141

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141




>44807_miR162:micropc
          Length = 141

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 88  tcgataaacctctgcatccag 108
           |||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141




>46470_miR162:micropc
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135




>45868_miR162:micropc
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135




>45605_miR162:micropc
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135




>45416_miR162:micropc
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139




>45279_miR162:micropc
          Length = 114

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  cgatcgataaacctctgcatccag 108
           |||||||||| |||||||||||||
Sbjct: 91  cgatcgataagcctctgcatccag 114




>45197_miR162:micropc
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcgataaacctctgcatcca 107
           ||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139