miRNEST 2.0, an integrative microRNA resource :: BLAST
>46744_miR1436:micropc
Length = 83
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 caaaaaagctcttatattatgggacggaaggagt 72
|||||| ||||||||||||||||||||| |||||
Sbjct: 50 caaaaatgctcttatattatgggacggagggagt 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 83 actccctccgtcccataata 64
>46836_miR1439:micropc
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 33 tagtgtcaaaaaagctcttatattatgggacggaaggagta 73
|||||| ||||| ||||||||||| ||||||||| ||||||
Sbjct: 45 tagtgtaaaaaatgctcttatattttgggacggagggagta 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 33 tagtgtcaaaaaagctcttatattatgggacggaaggagta 73
||||| |||||| ||||||||||| || |||||| ||||||
Sbjct: 41 tagtgccaaaaacgctcttatattttgagacggagggagta 1
>46560_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46416_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46351_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46296_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46229_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46082_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45853_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45812_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45616_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45608_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45459_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45450_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45382_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>45149_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>44955_miR1436:micropc
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 40 aaaaaagctcttatattatgggacggaaggagt 72
||||| ||||||||||||||||||||| |||||
Sbjct: 48 aaaaacgctcttatattatgggacggagggagt 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 80 actccctccgtcccataata 61
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 49 cttatattatgggacggaaggagt 72
|||||||||||||||||| |||||
Sbjct: 37 cttatattatgggacggagggagt 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataata 34
||||||||||||||||||||
Sbjct: 60 actccctccgtcccataata 41
>46658_miR1436:micropc
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 31 aatagtgtcaaaaaagctcttatattatgggacgga 66
||||| ||||||||| ||||| |||||||||||||
Sbjct: 40 aatagagtcaaaaaacgtcttacattatgggacgga 75
>46077_miR1130:micropc
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 31 aatagtgtcaaaaaagctcttatattatgggacgga 66
||||| ||||||||| ||||| |||||||||||||
Sbjct: 38 aatagagtcaaaaaacgtcttacattatgggacgga 73
>45479_miR1436:micropc
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 33 tagtgtcaaaaaagctcttatattatgggacg 64
||||||||||||| ||||| |||||||||||
Sbjct: 44 tagtgtcaaaaaacatcttacattatgggacg 75
>46428_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataat 33
|||||||||||||||||||
Sbjct: 69 actccctccgtcccataat 51
>46264_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataat 33
|||||||||||||||||||
Sbjct: 69 actccctccgtcccataat 51
>46261_miR1120:micropc
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 48 tcttatattatgggacgga 66
|||||||||||||||||||
Sbjct: 57 tcttatattatgggacgga 75
>46150_miR1130:micropc
Length = 75
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 36 tgtcaaaaaagctcttatattatgggacgga 66
|||||||||| ||||| |||||||||||||
Sbjct: 33 tgtcaaaaaatgtcttacattatgggacgga 3
>45393_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataat 33
|||||||||||||||||||
Sbjct: 69 actccctccgtcccataat 51
>45005_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataat 33
|||||||||||||||||||
Sbjct: 69 actccctccgtcccataat 51
>44928_miR1436:micropc
Length = 69
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 actccctccgtcccataat 33
|||||||||||||||||||
Sbjct: 69 actccctccgtcccataat 51
