miRNEST 2.0, an integrative microRNA resource :: BLAST
>45131_miR444:micropc
Length = 108
Score = 208 bits (105), Expect = 7e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 11 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 71 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
>46185_miR444:micropc
Length = 108
Score = 200 bits (101), Expect = 2e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 11 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 71 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
|||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaatt 54
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 103 caagcttgagacagcaactgcacaacttgcaagaaaatt 65
>44872_miR444:micropc
Length = 106
Score = 196 bits (99), Expect = 3e-51
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 12 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 60
Query: 72 gataattttcttgcangttgtgcagttgttgtctcaagcttgctgc 117
||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 61 gataattttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaatt 54
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 102 caagcttgagacagcaactgcacaacttgcaagaaaatt 64
>45238_miR444:micropc
Length = 108
Score = 192 bits (97), Expect = 4e-50
Identities = 105/108 (97%)
Strand = Plus / Plus
Query: 11 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 70
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccatac 60
Query: 71 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
|||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cgatcattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>45230_miR444:micropc
Length = 96
Score = 184 bits (93), Expect = 1e-47
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
>45525_miR444:micropc
Length = 94
Score = 180 bits (91), Expect = 2e-46
Identities = 93/94 (98%)
Strand = Plus / Minus
Query: 18 agctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 agctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataat 35
Query: 78 tttcttgcangttgtgcagttgttgtctcaagct 111
||||||||| ||||||||||||||||||||||||
Sbjct: 34 tttcttgcaagttgtgcagttgttgtctcaagct 1
>45562_miR444:micropc
Length = 96
Score = 176 bits (89), Expect = 3e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||| ||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgctgtctcaagctt 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaatt 54
||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 96 aagcttgagacagcaactgcacaacttgcaagaaaatt 59
>45024_miR444:micropc
Length = 96
Score = 176 bits (89), Expect = 3e-45
Identities = 94/96 (97%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 96 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgataa 37
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagttgtgcagttgttgtctcaagctt 1
>45135_miR444:micropc
Length = 96
Score = 168 bits (85), Expect = 6e-43
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>46476_miR444:micropc
Length = 96
Score = 161 bits (81), Expect = 2e-40
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45734_miR444:micropc
Length = 96
Score = 161 bits (81), Expect = 2e-40
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 161 bits (81), Expect = 2e-40
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 76
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45828_miR444:micropc
Length = 114
Score = 111 bits (56), Expect = 1e-25
Identities = 99/114 (86%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 11 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt------ggttttcgaa 64
||||||||||| | ||||||||||||| ||||||||||||||| | ||||| |
Sbjct: 1 ggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcaga 60
Query: 65 ccataccgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
>45451_miR444:micropc
Length = 110
Score = 109 bits (55), Expect = 5e-25
Identities = 93/105 (88%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccga 73
|||||||||||||||||||||||| |||||||||||| | |||||| | ||||||
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 74 taattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
>45168_miR444:micropc
Length = 110
Score = 109 bits (55), Expect = 5e-25
Identities = 93/105 (88%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccga 73
|||||||||||||||||||||||| |||||||||||| | |||||| | ||||||
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 74 taattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 118
| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
>45175_miR444:micropc
Length = 98
Score = 95.6 bits (48), Expect = 8e-21
Identities = 86/98 (87%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccgat 74
||||||||||||||||||||||| |||||||||||| | |||||| | |||||||
Sbjct: 98 aagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccgat 39
Query: 75 aattttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||||| |||||||||||||||||||||||||
Sbjct: 38 gattttcttgcaagttgtgcagttgttgtctcaagctt 1
>46210_miR444:micropc
Length = 102
Score = 87.7 bits (44), Expect = 2e-18
Identities = 81/94 (86%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 25 ggcagcaactgcatatcttgcaagaaaatt------ggttttcgaaccataccgataatt 78
||||||||||||| ||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 9 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 68
Query: 79 ttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||| |||||||||||||||||||||||||
Sbjct: 69 ttcttgcaagttgtgcagttgttgtctcaagctt 102
>45742_miR444:micropc
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| ||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaa 52
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45712_miR444:micropc
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 77 ttttcttgcangttgtgcagttgttgtctcaagctt 112
|||||||||| ||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaaa 52
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45665_miR444:micropc
Length = 111
Score = 58.0 bits (29), Expect = 2e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgc 117
||||||||| |||||||||||| || ||||||||||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| | |||||||||||
Sbjct: 107 caagcttgaggcagcaactgcacaacttgcaagaaa 72
>46669_miR444:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||| ||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
>46544_miR444:micropc
Length = 136
Score = 56.0 bits (28), Expect = 7e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||| ||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
>46412_miR444:micropc
Length = 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||| |||||||||||| ||||||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgctgtctcaagctt 1
>45976_miR444:micropc
Length = 133
Score = 56.0 bits (28), Expect = 7e-09
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||| ||||||||||||||| |||||||||
Sbjct: 99 tttcttgcaagttgtgcagttgttgcctcaagctt 133
>46601_miR444:micropc
Length = 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgc 117
||||||||| || ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>45144_miR444:micropc
Length = 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgc 117
||||||||| || ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>46299_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||| ||| |||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcatgacttgcaagaaa 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgc 117
||||||||| || |||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
>45960_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||| ||| |||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45334_miR444:micropc
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagctt 112
||||||||| |||||||||||| || |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaa 51
||||| ||||||||||||||| | |||||||||||
Sbjct: 101 aagcttgaggcagcaactgcacaacttgcaagaaa 67
>45904_miR444:micropc
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaa 51
||||| |||||||||||||||| |||||||||||
Sbjct: 141 aagcttgaggcagcaactgcatgacttgcaagaaa 107
