miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46048_miR1439:micropc
          Length = 58

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 39/41 (95%), Gaps = 2/41 (4%)
 Strand = Plus / Plus

                                                   
Query: 22 cccaaaataagtga--cacttattttgggacggagggagta 60
          ||||||||||||||  |||||||||||||||||||||||||
Sbjct: 16 cccaaaataagtgagtcacttattttgggacggagggagta 56



 Score = 52.0 bits (26), Expect = 5e-08
 Identities = 38/41 (92%), Gaps = 2/41 (4%)
 Strand = Plus / Minus

                                                   
Query: 10 tactccctcggtcccaaaataagtga--cacttattttggg 48
          ||||||||| ||||||||||||||||  |||||||||||||
Sbjct: 56 tactccctccgtcccaaaataagtgactcacttattttggg 16




>45970_miR1439:micropc
          Length = 99

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 37 acttattttgggacggagggagtac 61
          |||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtac 1



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 ttattttgggacggagggagta 60
          ||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagta 98



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tactccctcggtcccaaaataagt 33
          ||||||||| ||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25




>45205_miR1439:micropc
          Length = 99

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 37 acttattttgggacggagggagtac 61
          |||||||||||||||||||||||||
Sbjct: 25 acttattttgggacggagggagtac 1



 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 39 ttattttgggacggagggagta 60
          ||||||||||||||||||||||
Sbjct: 77 ttattttgggacggagggagta 98



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 tactccctcggtcccaaaataagt 33
          ||||||||| ||||||||||||||
Sbjct: 2  tactccctccgtcccaaaataagt 25




>45320_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 37 acttattttgggacggagggagta 60
          ||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 10 tactccctcggtcccaaaataagt 33
          ||||||||| ||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45276_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 37 acttattttgggacggagggagta 60
          ||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 10 tactccctcggtcccaaaataagt 33
          ||||||||| ||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>45016_miR1439:micropc
          Length = 74

 Score = 48.1 bits (24), Expect = 8e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 37 acttattttgggacggagggagta 60
          ||||||||||||||||||||||||
Sbjct: 49 acttattttgggacggagggagta 72



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 10 tactccctcggtcccaaaataagt 33
          ||||||||| ||||||||||||||
Sbjct: 72 tactccctccgtcccaaaataagt 49




>46679_miR1439:micropc
          Length = 97

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 34 gacacttattttgggacggagggagta 60
          |||||||||||||| ||||||||||||
Sbjct: 71 gacacttattttggaacggagggagta 97



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                     
Query: 34 gacacttattttgggacggagggagta 60
          |||| |||||||| |||||||||||||
Sbjct: 27 gacagttattttgagacggagggagta 1