miRNEST 2.0, an integrative microRNA resource :: BLAST
>46658_miR1436:micropc
Length = 79
Score = 65.9 bits (33), Expect = 4e-12
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 3 tccctccgtcccaaaatgtaaaac-ttttttgacactatgatagtatcaaaaaacgtctt 61
|||||||||||| ||||||| || ||||||||||||| |||| ||||||||||||||
Sbjct: 1 tccctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtctt 60
Query: 62 acattttgggtcggagg 78
||||| |||| ||||||
Sbjct: 61 acattatgggacggagg 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 3 tccctccgtcccaaaatgtaaaac-ttttttgacactatgatagtatcaaaaaacgtctt 61
||||||||||||| ||||||| || ||||||||| |||| |||| ||||||||||||||
Sbjct: 79 tccctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtctt 20
Query: 62 acatt 66
|||||
Sbjct: 19 acatt 15
>46077_miR1130:micropc
Length = 75
Score = 61.9 bits (31), Expect = 6e-11
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 5 cctccgtcccaaaatgtaaaac-ttttttgacactatgatagtatcaaaaaacgtcttac 63
|||||||||| ||||||| || ||||||||||||| |||| ||||||||||||||||
Sbjct: 1 cctccgtcccgtaatgtaagacgttttttgacactacaatagagtcaaaaaacgtcttac 60
Query: 64 attttgggtcggagg 78
||| |||| ||||||
Sbjct: 61 attatgggacggagg 75
Score = 61.9 bits (31), Expect = 6e-11
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 5 cctccgtcccaaaatgtaaaac-ttttttgacactatgatagtatcaaaaaacgtcttac 63
||||||||||| ||||||| || ||||||||| |||| |||| ||||||||||||||||
Sbjct: 75 cctccgtcccataatgtaagacgttttttgactctattgtagtgtcaaaaaacgtcttac 16
Query: 64 att 66
|||
Sbjct: 15 att 13
>45219_miR1436:micropc
Length = 54
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaa 25
|||||||||||||||||||||||||
Sbjct: 54 actccctccgtcccaaaatgtaaaa 30
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 50 aaaaaacgtcttacattttgggtcggagg 78
||||||||||||||||||| || ||||||
Sbjct: 33 aaaaaacgtcttacattttaggacggagg 5
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||| ||||||||| || |||||
Sbjct: 1 actccctccgtcctaaaatgtaagacgttttt 32
>46428_miR1436:micropc
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 caaaaaacgtcttacattttgggtcggagg 78
|||||||||||||||||| |||| ||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||||| ||||||| || |||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttt 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>46264_miR1436:micropc
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 caaaaaacgtcttacattttgggtcggagg 78
|||||||||||||||||| |||| ||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||||| ||||||| || |||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttt 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>45393_miR1436:micropc
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 caaaaaacgtcttacattttgggtcggagg 78
|||||||||||||||||| |||| ||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||||| ||||||| || |||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttt 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>45005_miR1436:micropc
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 caaaaaacgtcttacattttgggtcggagg 78
|||||||||||||||||| |||| ||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||||| ||||||| || |||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttt 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>44928_miR1436:micropc
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 caaaaaacgtcttacattttgggtcggagg 78
|||||||||||||||||| |||| ||||||
Sbjct: 36 caaaaaacgtcttacattatgggacggagg 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaaaactttttt 32
||||||||||||||| ||||||| || |||||
Sbjct: 69 actccctccgtcccataatgtaagacgttttt 38
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>46187_miR1132:micropc
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 50 aaaaaacgtcttacattttgggtcggagg 78
||||||||||||||||| |||| ||||||
Sbjct: 32 aaaaaacgtcttacattatgggacggagg 4
Score = 40.1 bits (20), Expect = 2e-04
Identities = 57/67 (85%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 2 ctccctccgtcccaaaatgtaaaac-ttttttgacac-tatgatagtatcaaaaaacgtc 59
|||||||||||||| ||||||| || |||||| |||| || |||| ||||| ||||||
Sbjct: 1 ctccctccgtcccataatgtaagacgttttttcacacgtacactagtgtcaaanaacgtc 60
Query: 60 ttacatt 66
|||||||
Sbjct: 61 ttacatt 67
>46150_miR1130:micropc
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 51/60 (85%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 5 cctccgtcccaaaatgtaaaac-ttttttgacactatgatagtatcaaaaaacgtcttac 63
||||||||||| ||||||| || |||||||||| || ||| ||||||||||||||||
Sbjct: 1 cctccgtcccataatgtaagacattttttgacattacactagagtcaaaaaacgtcttac 60
>46836_miR1439:micropc
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 84 actccctccgtcccaaaat 66
>46467_miR1130:micropc
Length = 56
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 31 tcaaaaaacgtcttacatt 13
>46433_miR1439:micropc
Length = 153
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaatgtaa 23
||||||||||| |||||||||||
Sbjct: 151 actccctccgttccaaaatgtaa 129
>46048_miR1439:micropc
Length = 58
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 55 actccctccgtcccaaaat 37
>45970_miR1439:micropc
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 3 actccctccgtcccaaaat 21
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 97 actccctccgtcccaaaat 79
>45448_miR1436:micropc
Length = 64
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 35 tcaaaaaacgtcttacatt 17
>45320_miR1439:micropc
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 71 actccctccgtcccaaaat 53
>45276_miR1439:micropc
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 71 actccctccgtcccaaaat 53
>45205_miR1439:micropc
Length = 99
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 3 actccctccgtcccaaaat 21
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 97 actccctccgtcccaaaat 79
>45044_miR1130:micropc
Length = 56
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 48 tcaaaaaacgtcttacatt 66
|||||||||||||||||||
Sbjct: 31 tcaaaaaacgtcttacatt 13
>45016_miR1439:micropc
Length = 74
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 actccctccgtcccaaaat 19
|||||||||||||||||||
Sbjct: 71 actccctccgtcccaaaat 53
