miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46275_miR535:micropc
          Length = 97

 Score =  192 bits (97), Expect = 4e-50
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 12  tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 60

                                                
Query: 72  tatttctgtgtacatgcgtgttctcgtcccgttgtca 108
           |||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatttctgtgtacatgcgtgttctcgtcccgttgtca 97




>44879_miR535:micropc
          Length = 97

 Score =  192 bits (97), Expect = 4e-50
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 12  tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgacgacgagagagagcacgcttgtagacaataatatgattttggacggttattacaacg 60

                                                
Query: 72  tatttctgtgtacatgcgtgttctcgtcccgttgtca 108
           |||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatttctgtgtacatgcgtgttctcgtcccgttgtca 97




>45695_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacgacgagagagagcacgcttgt 36
          ||||||||||||||||||| |||||
Sbjct: 1  tgacgacgagagagagcacacttgt 25




>45565_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacgacgagagagagcacgcttgt 36
          |||| ||||||||||||||||||||
Sbjct: 1  tgacaacgagagagagcacgcttgt 25




>45543_miR535:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 tgacgacgagagagagcacgcttgt 36
          |||| ||||||||||||||||||||
Sbjct: 1  tgacaacgagagagagcacgcttgt 25