miRNEST 2.0, an integrative microRNA resource :: BLAST
>45131_miR444:micropc
Length = 108
Score = 153 bits (77), Expect = 4e-38
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 16 ggtgacaaacttgaggcagcaactgcatatcttgcaagaaaattgggtttcagagcatac 75
|||||||| || |||||||||||||||||||||||||||||||||| |||| | |||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 76 cgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
>46185_miR444:micropc
Length = 108
Score = 151 bits (76), Expect = 2e-37
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 16 ggtgacaaacttgaggcagcaactgcatatcttgcaagaaaattgggtttcagagcatac 75
|||||||| || |||||||||||||||||||||||||||||||||| |||| | |||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 76 cgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaatt 59
|||||| ||||||||||| | ||||||||||||||
Sbjct: 99 cttgagacagcaactgcacaacttgcaagaaaatt 65
>45238_miR444:micropc
Length = 108
Score = 151 bits (76), Expect = 2e-37
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 16 ggtgacaaacttgaggcagcaactgcatatcttgcaagaaaattgggtttcagagcatac 75
|||||||| || |||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccatac 60
Query: 76 cgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgatcattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>46476_miR444:micropc
Length = 96
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||
Sbjct: 67 tgcaagttgtgcagttgttgtctcaagctt 96
>45734_miR444:micropc
Length = 96
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||
Sbjct: 67 tgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||
Sbjct: 67 tgcaagttgtgcagttgttgtctcaagctt 96
>44872_miR444:micropc
Length = 106
Score = 147 bits (74), Expect = 2e-36
Identities = 98/106 (92%)
Strand = Plus / Plus
Query: 17 gtgacaaacttgaggcagcaactgcatatcttgcaagaaaattgggtttcagagcatacc 76
||||||| || |||||||||||||||||||||||||||||||||| |||| | ||||||
Sbjct: 1 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 60
Query: 77 gatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gataattttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaatt 59
|||||| ||||||||||| | ||||||||||||||
Sbjct: 98 cttgagacagcaactgcacaacttgcaagaaaatt 64
>45525_miR444:micropc
Length = 94
Score = 137 bits (69), Expect = 2e-33
Identities = 84/89 (94%)
Strand = Plus / Minus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||
Sbjct: 89 gaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataattttct 30
Query: 88 tgcaagttgtgcagttgttgtctcaagct 116
|||||||||||||||||||||||||||||
Sbjct: 29 tgcaagttgtgcagttgttgtctcaagct 1
>45230_miR444:micropc
Length = 96
Score = 133 bits (67), Expect = 4e-32
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
|||| |||||||||||||||||||||||||
Sbjct: 67 tgcangttgtgcagttgttgtctcaagctt 96
>45828_miR444:micropc
Length = 114
Score = 131 bits (66), Expect = 1e-31
Identities = 103/114 (90%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 16 ggtgacaaacttgaggcagcaactgcatatcttgcaagaaaatt----gggttt--caga 69
|||||||| |||| ||||||||||||| ||||||||||||||| |||||| ||||
Sbjct: 1 ggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcaga 60
Query: 70 gcataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||||| |||||||||| || | ||||||||
Sbjct: 44 gattttcttgcaagatgtgcagttgctgccacaagcttg 6
>45562_miR444:micropc
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||| ||||||||||||
Sbjct: 67 tgcaagttgtgcagttgctgtctcaagctt 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaatt 59
|||||| ||||||||||| | ||||||||||||||
Sbjct: 93 cttgagacagcaactgcacaacttgcaagaaaatt 59
>45135_miR444:micropc
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 7 gaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatcattttct 66
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||
Sbjct: 67 tgcaagttgtgcagttgttgtctcaagctt 96
>45024_miR444:micropc
Length = 96
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Minus
Query: 28 gaggcagcaactgcatatcttgcaagaaaattgggtttcagagcataccgatgattttct 87
|||||||||||||||||||||||||||||||||| ||| | ||||||||| |||||||
Sbjct: 90 gaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgataattttct 31
Query: 88 tgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||
Sbjct: 30 tgcaagttgtgcagttgttgtctcaagctt 1
>46210_miR444:micropc
Length = 102
Score = 109 bits (55), Expect = 5e-25
Identities = 89/99 (89%), Gaps = 6/99 (6%)
Strand = Plus / Plus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaatt----gggttt--cagagcataccga 78
|||| ||||||||||||| ||||||||||||||| |||||| |||| ||||||||
Sbjct: 4 cttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccga 63
Query: 79 tgattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgattttcttgcaagttgtgcagttgttgtctcaagctt 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 80 gattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||| |||||||||| || | |||||||
Sbjct: 38 gattttcttgcaagatgtgcagttgctgccacaagctt 1
>45451_miR444:micropc
Length = 110
Score = 101 bits (51), Expect = 1e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 73 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45168_miR444:micropc
Length = 110
Score = 101 bits (51), Expect = 1e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 73 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 taccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45175_miR444:micropc
Length = 98
Score = 89.7 bits (45), Expect = 5e-19
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 73 taccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 taccgatgattttcttgcaagttgtgcagttgttgtctcaagctt 1
>45976_miR444:micropc
Length = 133
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 78 atgattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||| ||||||||||||||||||||||||| |||||||||
Sbjct: 94 atgactttcttgcaagttgtgcagttgttgcctcaagctt 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||| |||||||| | |||||||||||
Sbjct: 130 cttgaggcaacaactgcacaacttgcaagaaa 99
>45742_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaa 57
||||||||| |||||||| | ||||||||||||
Sbjct: 100 cttgaggcaacaactgcacaacttgcaagaaaa 68
>45712_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaaa 57
||||||||| |||||||| | ||||||||||||
Sbjct: 100 cttgaggcaacaactgcacaacttgcaagaaaa 68
>45665_miR444:micropc
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| | |||||||||||
Sbjct: 103 cttgaggcagcaactgcacaacttgcaagaaa 72
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||| ||||||||||| |||| |||||
Sbjct: 40 tttcttgcaagtaatgcagttgttgcctcatgcttg 5
>46669_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||| |||||||| | |||||||||||
Sbjct: 133 cttgaggcaacaactgcacaacttgcaagaaa 102
>46544_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||| |||||||| | |||||||||||
Sbjct: 133 cttgaggcaacaactgcacaacttgcaagaaa 102
>46412_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||| ||||||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgctgtctcaagctt 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||| ||||||||||| | |||||||||||
Sbjct: 4 cttgagacagcaactgcacaacttgcaagaaa 35
>46601_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 143 cttgaggcagcaactgcacgacttgcaagaaa 112
>45144_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 143 cttgaggcagcaactgcacgacttgcaagaaa 112
>46299_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45960_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45334_miR444:micropc
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||| || |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| | |||||||||||
Sbjct: 98 cttgaggcagcaactgcacaacttgcaagaaa 67
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| |||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||||||||||||| |||||||||||
Sbjct: 143 cttgaggcagcaactgcatgacttgcaagaaa 112
>45904_miR444:micropc
Length = 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
||||||||||||||||||| |||||||||||
Sbjct: 138 cttgaggcagcaactgcatgacttgcaagaaa 107
>46182_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 141 cttgaggcagcaactgcacgacttgcaagaaa 110
>44855_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cttgaggcagcaactgcatatcttgcaagaaa 56
|||||||||||||||||| |||||||||||
Sbjct: 141 cttgaggcagcaactgcacgacttgcaagaaa 110
