miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46636_miR168:micropc
          Length = 141

 Score =  135 bits (68), Expect = 1e-32
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 137
           |||||||||||||||||||||||||||||||||||||||||||||||||||       ||
Sbjct: 53  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgaaaaaaatg 112

                                        
Query: 138 cgaattggatcccgccttgcatcaactga 166
           |||||||||||||||||||||||||||||
Sbjct: 113 cgaattggatcccgccttgcatcaactga 141




>45425_miR168:micropc
          Length = 141

 Score =  135 bits (68), Expect = 1e-32
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 137
           |||||||||||||||||||||||||||||||||||||||||||||||||||       ||
Sbjct: 53  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgaaaaaaatg 112

                                        
Query: 138 cgaattggatcccgccttgcatcaactga 166
           |||||||||||||||||||||||||||||
Sbjct: 113 cgaattggatcccgccttgcatcaactga 141




>45228_miR168:micropc
          Length = 141

 Score =  117 bits (59), Expect = 3e-27
 Identities = 81/89 (91%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 137
           ||||||||||||||||||||||||||||||| |||||||||||||||||||       ||
Sbjct: 54  gacagcgaggtggcgtgttgtaattggtcgtaacgtttaaattaatgattg-aaaaaatg 112

                                        
Query: 138 cgaattggatcccgccttgcatcaactga 166
           |||||||||||||||||||||||||||||
Sbjct: 113 cgaattggatcccgccttgcatcaactga 141




>44967_miR168:micropc
          Length = 141

 Score =  117 bits (59), Expect = 3e-27
 Identities = 81/89 (91%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 78  gacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgattgnnnnnnntg 137
           ||||||||||||||||||||||||||||||| |||||||||||||||||||       ||
Sbjct: 54  gacagcgaggtggcgtgttgtaattggtcgtaacgtttaaattaatgattg-aaaaaatg 112

                                        
Query: 138 cgaattggatcccgccttgcatcaactga 166
           |||||||||||||||||||||||||||||
Sbjct: 113 cgaattggatcccgccttgcatcaactga 141




>46663_miR168:micropc
          Length = 88

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 59  gcgaattggatcccgccttgcatcaactga 88



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>46512_miR168:micropc
          Length = 88

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 59  gcgaattggatcccgccttgcatcaactga 88



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>46427_miR168:micropc
          Length = 88

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 59  gcgaattggatcccgccttgcatcaactga 88



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>46343_miR168:micropc
          Length = 144

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 115 gcgaattggatcccgccttgcatcaactga 144



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>46278_miR168:micropc
          Length = 138

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 109 gcgaattggatcccgccttgcatcaactga 138



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>46189_miR168:micropc
          Length = 88

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 59  gcgaattggatcccgccttgcatcaactga 88



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>45952_miR168:micropc
          Length = 155

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 126 gcgaattggatcccgccttgcatcaactga 155



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 tcgcttggtgcaggtcgggaactg 49
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24




>45700_miR168:micropc
          Length = 155

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 126 gcgaattggatcccgccttgcatcaactga 155



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 tcgcttggtgcaggtcgggaactg 49
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24




>45119_miR168:micropc
          Length = 144

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 115 gcgaattggatcccgccttgcatcaactga 144



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>44989_miR168:micropc
          Length = 138

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 137 gcgaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||||
Sbjct: 109 gcgaattggatcccgccttgcatcaactga 138



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>46333_miR168:micropc
          Length = 118

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 139 gaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||
Sbjct: 91  gaattggatcccgccttgcatcaactga 118



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>45406_miR168:micropc
          Length = 118

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 139 gaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||
Sbjct: 91  gaattggatcccgccttgcatcaactga 118



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>45088_miR168:micropc
          Length = 118

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 139 gaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||
Sbjct: 91  gaattggatcccgccttgcatcaactga 118



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>44951_miR168:micropc
          Length = 118

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 139 gaattggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||||
Sbjct: 91  gaattggatcccgccttgcatcaactga 118



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 26 tcgcttggtgcaggtcgggaactgatt 52
          |||||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactgatt 27




>46038_miR168:micropc
          Length = 104

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 141 attggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||
Sbjct: 79  attggatcccgccttgcatcaactga 104



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>45956_miR168:micropc
          Length = 100

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 141 attggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||
Sbjct: 75  attggatcccgccttgcatcaactga 100



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>45301_miR168:micropc
          Length = 104

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 141 attggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||
Sbjct: 79  attggatcccgccttgcatcaactga 104



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22




>44865_miR168:micropc
          Length = 100

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 141 attggatcccgccttgcatcaactga 166
           ||||||||||||||||||||||||||
Sbjct: 75  attggatcccgccttgcatcaactga 100



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>46717_miR168:micropc
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 tcgcttggtgcaggtcgggaactg 49
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 77  tcccgccttgcatcaactga 96




>46366_miR168:micropc
          Length = 96

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 tcgcttggtgcaggtcgggaactg 49
          ||||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaactg 24



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 77  tcccgccttgcatcaactga 96




>46098_miR168:micropc
          Length = 101

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 tcgcttggtgcaggtcgggaact 48
          |||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaact 23



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 82  tcccgccttgcatcaactga 101




>45758_miR168:micropc
          Length = 101

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 tcgcttggtgcaggtcgggaact 48
          |||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaact 23



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 82  tcccgccttgcatcaactga 101




>46522_miR168:micropc
          Length = 110

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 gatcccgccttgcatcaactga 166
           ||||||||||||||||||||||
Sbjct: 89  gatcccgccttgcatcaactga 110




>46406_miR168:micropc
          Length = 110

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcgggaac 22



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 gatcccgccttgcatcaactga 166
           ||||||||||||||||||||||
Sbjct: 89  gatcccgccttgcatcaactga 110




>46209_miR168:micropc
          Length = 133

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 142 ttggatcccgccttgcatcaactga 166
           |||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>45664_miR168:micropc
          Length = 133

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 142 ttggatcccgccttgcatcaactga 166
           |||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>45247_miR168:micropc
          Length = 134

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 142 ttggatcccgccttgcatcaactga 166
           |||| ||||||||||||||||||||
Sbjct: 110 ttgggtcccgccttgcatcaactga 134



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>44885_miR168:micropc
          Length = 134

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 142 ttggatcccgccttgcatcaactga 166
           |||| ||||||||||||||||||||
Sbjct: 110 ttgggtcccgccttgcatcaactga 134



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>46666_miR168:micropc
          Length = 125

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125




>46411_miR168:micropc
          Length = 145

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20




>46016_miR168:micropc
          Length = 125

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 tcccgccttgcatcaactga 166
           ||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125




>45240_miR168:micropc
          Length = 145

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 tcgcttggtgcaggtcggga 45
          ||||||||||||||||||||
Sbjct: 1  tcgcttggtgcaggtcggga 20