miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>45739_miR166:micropc
          Length = 84

 Score =  167 bits (84), Expect = 2e-42
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                       
Query: 21  agggatgttggctggctcggtgcaatcaccttttcttaccatttcgtataaaagggtgat 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agggatgttggctggctcggtgcaatcaccttttcttaccatttcgtataaaagggtgat 60

                                   
Query: 81  ggcatcggaccaggcttcattcct 104
           ||||||||||||||||||||||||
Sbjct: 61  ggcatcggaccaggcttcattcct 84




>45937_miR166:micropc
          Length = 82

 Score =  163 bits (82), Expect = 4e-41
 Identities = 82/82 (100%)
 Strand = Plus / Plus

                                                                       
Query: 22  gggatgttggctggctcggtgcaatcaccttttcttaccatttcgtataaaagggtgatg 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gggatgttggctggctcggtgcaatcaccttttcttaccatttcgtataaaagggtgatg 60

                                 
Query: 82  gcatcggaccaggcttcattcc 103
           ||||||||||||||||||||||
Sbjct: 61  gcatcggaccaggcttcattcc 82




>45800_miR166:micropc
          Length = 92

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  tcggaccaggcttcattcct 104
           ||||||||||||||||||||
Sbjct: 72  tcggaccaggcttcattcct 91




>45618_miR166:micropc
          Length = 90

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 85  tcggaccaggcttcattcct 104
           ||||||||||||||||||||
Sbjct: 71  tcggaccaggcttcattcct 90