miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45744_miR399:micropc
Length = 97
Score = 192 bits (97), Expect = 4e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 13 gggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaact 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaact 60
Query: 73 ttcttaatgtgcaatctgccaaaggagatttgcccag 109
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcttaatgtgcaatctgccaaaggagatttgcccag 97
>45866_miR399:micropc
Length = 95
Score = 188 bits (95), Expect = 6e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 13 gggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaact 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaact 60
Query: 73 ttcttaatgtgcaatctgccaaaggagatttgccc 107
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcttaatgtgcaatctgccaaaggagatttgccc 95
>44956_miR399:micropc
Length = 93
Score = 184 bits (93), Expect = 1e-47
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 14 ggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaactt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaagttctccattggcaggtagccactatgatatgcatctcataaatatttgcaactt 60
Query: 74 tcttaatgtgcaatctgccaaaggagatttgcc 106
|||||||||||||||||||||||||||||||||
Sbjct: 61 tcttaatgtgcaatctgccaaaggagatttgcc 93
>45642_miR399:micropc
Length = 96
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 76 tctgccaaaggagatttgccc 96
>45548_miR399:micropc
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgccc 107
|||||||||||||||||||||
Sbjct: 78 tctgccaaaggagatttgccc 98
>45724_miR399:micropc
Length = 72
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 ctgccaaaggagatttgccc 107
||||||||||||||||||||
Sbjct: 53 ctgccaaaggagatttgccc 72
>45632_miR399:micropc
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 tctgccaaaggagatttgcc 106
||||||||||||||||||||
Sbjct: 75 tctgccaaaggagatttgcc 94
