miRNEST 2.0, an integrative microRNA resource :: BLAST
>44861_miR408:micropc
Length = 121
Score = 125 bits (63), Expect = 1e-29
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 40 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 60
Query: 100 aag 102
|||
Sbjct: 61 aag 63
>44821_miR408:micropc
Length = 119
Score = 123 bits (62), Expect = 5e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 41 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 60
Query: 101 ag 102
||
Sbjct: 61 ag 62
>45394_miR408:micropc
Length = 112
Score = 71.9 bits (36), Expect = 2e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggct 160
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 73 tctgttgtggctacgctcatgcactgcctcttccctggct 112
Score = 48.1 bits (24), Expect = 3e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 40 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 99
||||||||| |||||| ||| ||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 1 ggctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatga 59
>44968_miR408:micropc
Length = 110
Score = 69.9 bits (35), Expect = 7e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggc 159
|||||||||||||||||||||||||||||||| ||||||
Sbjct: 72 tctgttgtggctacgctcatgcactgcctcttccctggc 110
Score = 46.1 bits (23), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 41 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 99
|||||||| |||||| ||| ||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 1 gctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatga 58
>45398_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggct 160
||||||||||| | ||||||||||||||||| |||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggc 159
||||||||||| | ||||||||||||||||| ||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggc 159
||||||||||| | ||||||||||||||||| ||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>46359_miR408:micropc
Length = 85
Score = 48.1 bits (24), Expect = 3e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggct 160
|||||| ||||| | ||||||||||||||||| |||||||
Sbjct: 46 tctgttttggcttcactcatgcactgcctcttccctggct 85
Score = 44.1 bits (22), Expect = 4e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 40 ggctgggaacaggcagggcacgaatggagctatcaacagaaa 81
|||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 ggctgggaacaggcagagcatggatgcagctattaacagaaa 42
>46309_miR408:micropc
Length = 83
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggc 159
|||||| ||||| | ||||||||||||||||| ||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 41 gctgggaacaggcagggcacgaatggagctatcaacagaaa 81
||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaa 41
>46155_miR408:micropc
Length = 83
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 121 tctgttgtggctacgctcatgcactgcctctttcctggc 159
|||||| ||||| | ||||||||||||||||| ||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 41 gctgggaacaggcagggcacgaatggagctatcaacagaaa 81
||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaa 41
>45531_miR408:micropc
Length = 89
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggct 160
||||||||||| ||||||||||||||||| |||||||
Sbjct: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
>46728_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggc 159
||||||||||| ||||||||||||||||| ||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 122 ctgttgtggctacgctcatgcactgcctctttcctggc 159
||||||||||| ||||||||||||||||| ||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>45949_miR408:micropc
Length = 99
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 123 tgttgtggctacgctcatgcactgcctctttcctggc 159
|||||||||| ||||||||||||||||| ||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
>45551_miR408:micropc
Length = 99
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 123 tgttgtggctacgctcatgcactgcctctttcctggc 159
|||||||||| ||||||||||||||||| ||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
