miRNEST 2.0, an integrative microRNA resource :: BLAST
>44861_miR408:micropc
Length = 121
Score = 125 bits (63), Expect = 1e-29
Identities = 102/121 (84%)
Strand = Plus / Plus
Query: 32 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgg 91
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 60
Query: 92 aagnnnnnnnnnnnnnnnnnntctgttgtggctacgctcatgcactgcctcttccctggc 151
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggagagagagagagagagatctgttgtggctacgctcatgcactgcctcttccctggc 120
Query: 152 t 152
|
Sbjct: 121 t 121
>44821_miR408:micropc
Length = 119
Score = 121 bits (61), Expect = 2e-28
Identities = 100/119 (84%)
Strand = Plus / Plus
Query: 33 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgga 92
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 60
Query: 93 agnnnnnnnnnnnnnnnnnntctgttgtggctacgctcatgcactgcctcttccctggc 151
|| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagagagagagagagagatctgttgtggctacgctcatgcactgcctcttccctggc 119
>45394_miR408:micropc
Length = 112
Score = 79.8 bits (40), Expect = 7e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggct 152
||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tctgttgtggctacgctcatgcactgcctcttccctggct 112
Score = 46.1 bits (23), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 32 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatg 90
||||||||| |||||| ||| ||||| |||||| ||||||| |||| |||||||||||
Sbjct: 1 ggctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatg 58
>44968_miR408:micropc
Length = 110
Score = 77.8 bits (39), Expect = 3e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggc 151
|||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tctgttgtggctacgctcatgcactgcctcttccctggc 110
Score = 44.1 bits (22), Expect = 4e-05
Identities = 50/58 (86%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 33 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatg 90
|||||||| |||||| ||| ||||| |||||| ||||||| |||| |||||||||||
Sbjct: 1 gctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatg 57
>45398_miR408:micropc
Length = 89
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggct 152
||||||||||| | |||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggc 151
||||||||||| | ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggc 151
||||||||||| | ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>46359_miR408:micropc
Length = 85
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggct 152
|||||| ||||| | |||||||||||||||||||||||||
Sbjct: 46 tctgttttggcttcactcatgcactgcctcttccctggct 85
Score = 44.1 bits (22), Expect = 4e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 32 ggctgggaacaggcagggcacgaatggagctatcaacagaaa 73
|||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 ggctgggaacaggcagagcatggatgcagctattaacagaaa 42
>46309_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggc 151
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 33 gctgggaacaggcagggcacgaatggagctatcaacagaaa 73
||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaa 41
>46155_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 113 tctgttgtggctacgctcatgcactgcctcttccctggc 151
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
Score = 42.1 bits (21), Expect = 2e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 33 gctgggaacaggcagggcacgaatggagctatcaacagaaa 73
||||||||||||||| ||| | ||| |||||| ||||||||
Sbjct: 1 gctgggaacaggcagagcatggatgcagctattaacagaaa 41
>45531_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggct 152
||||||||||| |||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
>46728_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggc 151
||||||||||| ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 114 ctgttgtggctacgctcatgcactgcctcttccctggc 151
||||||||||| ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>45949_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 115 tgttgtggctacgctcatgcactgcctcttccctggc 151
|||||||||| ||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
>45551_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 115 tgttgtggctacgctcatgcactgcctcttccctggc 151
|||||||||| ||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
>45814_miR408:micropc
Length = 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggct 152
|||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggct 85
>45593_miR408:micropc
Length = 85
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggct 152
|||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggc 151
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46401_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggc 151
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggc 151
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 130 catgcactgcctcttccctggc 151
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
