miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46836_miR1439:micropc
          Length = 86

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 10 atactccctccgtcccaaaatat 32
          |||||||||||||||||||||||
Sbjct: 86 atactccctccgtcccaaaatat 64



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 151 atattttgggacggagggagta 172
           ||||||||||||||||||||||
Sbjct: 64  atattttgggacggagggagta 85




>46048_miR1439:micropc
          Length = 58

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 57 atactccctccgtcccaaaata 36



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 36  tattttgggacggagggagta 56




>45970_miR1439:micropc
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 152 tattttgggacggagggagtac 173
           ||||||||||||||||||||||
Sbjct: 22  tattttgggacggagggagtac 1



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaata 78



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tactccctccgtcccaaaata 31
          |||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaata 22



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 78  tattttgggacggagggagta 98




>45320_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaata 52



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 52  tattttgggacggagggagta 72




>45276_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaata 52



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 52  tattttgggacggagggagta 72




>45205_miR1439:micropc
          Length = 99

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 152 tattttgggacggagggagtac 173
           ||||||||||||||||||||||
Sbjct: 22  tattttgggacggagggagtac 1



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 99 atactccctccgtcccaaaata 78



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 tactccctccgtcccaaaata 31
          |||||||||||||||||||||
Sbjct: 2  tactccctccgtcccaaaata 22



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 78  tattttgggacggagggagta 98




>45016_miR1439:micropc
          Length = 74

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 10 atactccctccgtcccaaaata 31
          ||||||||||||||||||||||
Sbjct: 73 atactccctccgtcccaaaata 52



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 tattttgggacggagggagta 172
           |||||||||||||||||||||
Sbjct: 52  tattttgggacggagggagta 72




>46433_miR1439:micropc
          Length = 153

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 10  atactccctccgtcccaaaatattagtcgtttt 42
           ||||||||||||| ||||||| | |||||||||
Sbjct: 153 atactccctccgttccaaaatgtaagtcgtttt 121



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 141 aaaacgactaatattttgggacggagggagta 172
           ||||||||| | ||||||| ||||||||||||
Sbjct: 121 aaaacgacttacattttggaacggagggagta 152